BQ623160

Overview
NameBQ623160
Unique NameBQ623160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRS +Y  R  AK+IVA G A++  +QV+YAIGV EP+S+ +++YGTG   ++E++  V+++FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  270 GGGAFSGKDATKVDRSASYAARYIAKNIVAAGYAKKAEIQVAYAIGVAEPVSIMINTYGTGTRSEEELIAAVRKAFDLRPAGIIEMLDLKR---PIYKQTAAYGHFGRTDVDLPWE 382          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRS +Y  R  AK+IVA G A++  +QV+YAIGV EP+S+ +++YGTG   ++E++  V+++FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  270 GGGAFSGKDATKVDRSASYAARYIAKNIVAAGYAKKAEIQVAYAIGVAEPVSIMINTYGTGTRSEEELIAAVRKAFDLRPAGIIEMLDLKR---PIYKQTAAYGHFGRTDVDLPWE 382          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRS +Y  R  AK++VA GLA +  VQ++YAIGV EP+S+ VD+ GTGK+ D+ ++  ++E+FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  270 GGGAFSGKDATKVDRSASYAARYIAKNVVAAGLADQVEVQLAYAIGVAEPVSIAVDTAGTGKVSDEALINAIRENFDLRPAGIIKMLDLQR---PIYRQTAAYGHFGRTDIDLPWE 382          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKD TKVDRS +Y  R  AK+IVA  LA++C VQ++YAIGV EP+SV+V+++GTG + + ++   V++ FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  270 GGGAFSGKDATKVDRSASYAARYIAKNIVAAELAQKCEVQIAYAIGVAEPVSVYVNTFGTGTVAEAKLATAVRDLFDLRPAGIIQMLDLKR---PIYKQTAAYGHFGRTDIDLPWE 382          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_HAEPS (S-adenosylmethionine synthetase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 64/116 (55.17%), Postives = 84/116 (72.41%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIG+ EP S+ V+++GTGK+ ++  +++V+E FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMVETFGTGKVSNEVFVRLVREHFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_CORU7 (S-adenosylmethionine synthetase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA R  VQV+YAIGV  P+ ++V+++GT K P ++I + V E FD RP  +   LDL R     + +TAAYGHFGR+D D  WE
Sbjct:  274 GGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLADRAEVQVAYAIGVARPVGLYVETFGTEKAPVEDIQRAVAEVFDLRPASILRELDLLR---PIYAQTAAYGHFGRNDLDLPWE 386          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 65/118 (55.08%), Postives = 87/118 (73.73%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E FD RP  +T  L+L +     + +TAAYGHFGR+  +  FTWE
Sbjct:  260 GGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSNTAFTWE 374          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28
Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 371
            GGGAFSGKD +KVDRS AY  R  AKS+VA GL +R  VQ SYAIG+ EPLS+ VD+YGT    D EI++I+K++FD RPG++   LDL R     +L TA+YGHF   + +++WE  K L++
Sbjct:  267 GGGAFSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKSDDEIIEIIKKNFDLRPGVLVKELDLAR---PIYLPTASYGHF--TNQEYSWEKPKKLEF 384          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_THEFY (S-adenosylmethionine synthetase OS=Thermobifida fusca (strain YX) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.438e-28
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA R  VQV+YAIG   P+ VF++++GT K+  +++ K V E FD RP  +  +LDL R     + +T+ YGHFGR+ PDFTWE
Sbjct:  271 GGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLADRVEVQVAYAIGKAHPVGVFLETFGTEKVAPEQLEKAVLEVFDLRPAAIIRDLDLLR---PIYSQTSVYGHFGRELPDFTWE 383          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.438e-28
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKR---GGNGRFLK-TAAYGHFGRDDPDFTWE 350
            GGGAFSGKDPTKVDRS +Y  R  AK+IVA GLA +C VQVSYAIGV  P+SV ++++GT  + +  +L++V++ F+ RP  +    DL+      NGRF +  AAYGHFGR D D  WE
Sbjct:  280 GGGAFSGKDPTKVDRSASYACRYVAKNIVAAGLAEKCEVQVSYAIGVARPVSVMIETFGTCTVDEDRLLEVVQKHFELRPAGIIQAFDLRNLPSQRNGRFYQDMAAYGHFGRTDLDLPWE 399          
The following BLAST results are available for this feature:
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACRJ1.867e-2853.45S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD1.867e-2853.45S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACPL1.867e-2854.31S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_LACBA1.867e-2854.31S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_HAEPS1.867e-2855.17S-adenosylmethionine synthetase OS=Haemophilus par... [more]
METK_CORU71.867e-2856.03S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_ACIBY1.867e-2855.08S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK2_YEAST1.867e-2853.66S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK_THEFY2.438e-2855.17S-adenosylmethionine synthetase OS=Thermobifida fu... [more]
METK_SYNP22.438e-2853.33S-adenosylmethionine synthetase OS=Synechococcus s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00251 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00251 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623160 ID=BQ623160; Name=BQ623160; organism=Citrus sinensis; type=EST; length=590bp
GGGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGT
GGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCT
TGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGC
CATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAG
GAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGAT
GACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGA
CTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAA
GTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGA
AAAGTGAAAACTATCCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGA
TGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATC
TCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTGT
CTTCTTTTCCCCACTTCTTTTTTGGGTTTGGGTTAAATGT
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