BQ623160

Overview
NameBQ623160
Unique NameBQ623160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28
Identity = 63/116 (54.31%), Postives = 82/116 (70.69%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIG+ EP S+ ++++ TGKI +K ++ +V+  FD RP  +   LDL R     +L TA YGHFGR+  +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMIETFRTGKISNKSLINLVRNIFDLRPYGLIEMLDLLR---PIYLNTAVYGHFGRE--EFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28
Identity = 63/116 (54.31%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28
Identity = 63/116 (54.31%), Postives = 85/116 (73.28%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SORC5 (S-adenosylmethionine synthetase OS=Sorangium cellulosum (strain So ce56) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDPTKVDRS  Y  R  AK++VA+ LA RC VQ++YAIGV +P+ V V+++GTG++ +  + K + ++FD RP  +   LDL +     + KTAAYGHFGRD  +FTWE
Sbjct:  261 GGGAFSGKDPTKVDRSACYYARYVAKNVVASKLAARCEVQIAYAIGVAQPVGVHVNTFGTGRVGEDVLEKYIMQNFDMRPKAIIEQLDLLK---PIYRKTAAYGHFGRD--EFTWE 371
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT KIP   +  +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLAERCEIQVSYAIGVAEPTSITIETFGTEKIPADNLTALVREFFDLRPHGLITMLDLLQ---PIYRETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_SERP5 (S-adenosylmethionine synthetase OS=Serratia proteamaculans (strain 568) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP +++  +V+E FD RP  +   +DL +     + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTEQLTLLVREFFDLRPYGLIQMMDLLQ---PIYRETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_MYCPA (S-adenosylmethionine synthetase OS=Mycobacterium paratuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = 3 
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY +R  AK+IVA GLA R  VQV+YAIG   P+ +FV+++GT  +   +I KIV E FD RPG +  +LDL R     + +TAAYGHFGR D +  WE
Sbjct:  279 GGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIGKAAPVGLFVETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLR---PIYAQTAAYGHFGRTDVELPWE 391
The following BLAST results are available for this feature:
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BUCAT3.184e-2853.45S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAP3.184e-2854.31S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAI3.184e-2853.45S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA53.184e-2853.45S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_ACTPJ3.184e-2854.31S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP73.184e-2854.31S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_SORC54.159e-2853.45S-adenosylmethionine synthetase OS=Sorangium cellu... [more]
METK_SODGM4.159e-2856.03S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_SERP54.159e-2856.03S-adenosylmethionine synthetase OS=Serratia protea... [more]
METK_MYCPA4.159e-2856.03S-adenosylmethionine synthetase OS=Mycobacterium p... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00251 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00251 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623160 ID=BQ623160; Name=BQ623160; organism=Citrus sinensis; type=EST; length=590bp
GGGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGT
GGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCT
TGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGC
CATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAG
GAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGAT
GACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGA
CTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAA
GTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGA
AAAGTGAAAACTATCCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGA
TGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATC
TCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTGT
CTTCTTTTCCCCACTTCTTTTTTGGGTTTGGGTTAAATGT
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