BQ623160

Overview
NameBQ623160
Unique NameBQ623160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1041..1628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 63/116 (54.31%), Postives = 81/116 (69.83%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDPTKVDRSGAY  R  AK+IVA GLA++  VQ++YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  +   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  273 GGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQLAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_HELHP (S-adenosylmethionine synthetase OS=Helicobacter hepaticus GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK++VA+G+  + IVQV+YAIGV EP+S+ VD+ GTGK+ D ++ + VK  F   P  +  +LDL R     + KTAAYGHFGR+  +F+WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNLVASGVCDKAIVQVAYAIGVVEPVSILVDTQGTGKVEDSKLTECVKAVFRLTPKGIIESLDLLR---PIYRKTAAYGHFGRELNEFSWE 371          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_ENT38 (S-adenosylmethionine synthetase OS=Enterobacter sp. (strain 638) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKLPTEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_DESDG (S-adenosylmethionine synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 61/116 (52.59%), Postives = 84/116 (72.41%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRSGAY+ R  AK++VA GLA +C VQ++Y IGV +P+SV   S G+  I D+ + + V++ FD RP  ++  LDL+R     + K+A YGHFGR+ P+F+WE
Sbjct:  265 GGGAFSGKDPSKVDRSGAYMGRYIAKNVVAAGLAPKCEVQIAYCIGVADPVSVLCTSLGSSDISDEVLTQAVRDVFDLRPYHISKRLDLRR---PIYKKSACYGHFGREIPEFSWE 377          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 371
            GGGAFSGKD +KVDRS AY  R  AKS+VA GL +R  VQ SYAIG+ EPLS+ VD+YGT    D+EI+ I+ ++FD RPG++   LDL R     +L TA+YGHF   + ++ WE  K LK+
Sbjct:  265 GGGAFSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKSDEEIIDIISKNFDLRPGVLVKELDLAR---PIYLPTASYGHF--TNQEYPWEKPKTLKF 382          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_YERPY (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.431e-28
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_YERPS (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.431e-28
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_YERPP (S-adenosylmethionine synthetase OS=Yersinia pestis (strain Pestoides F) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.431e-28
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_YERPN (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.431e-28
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Match: METK_YERPG (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.431e-28
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 3
Query:    3 GGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 350
            GGGAFSGKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  259 GGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
The following BLAST results are available for this feature:
BLAST of BQ623160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LISW64.159e-2854.31S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_HELHP4.159e-2854.31S-adenosylmethionine synthetase OS=Helicobacter he... [more]
METK_ENT384.159e-2856.03S-adenosylmethionine synthetase OS=Enterobacter sp... [more]
METK_DESDG4.159e-2852.59S-adenosylmethionine synthetase OS=Desulfovibrio d... [more]
METK1_YEAST4.159e-2853.66S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK_YERPY5.431e-2856.90S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPS5.431e-2856.90S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPP5.431e-2856.90S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPN5.431e-2856.90S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPG5.431e-2856.90S-adenosylmethionine synthetase OS=Yersinia pestis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00251 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00251 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623160 ID=BQ623160; Name=BQ623160; organism=Citrus sinensis; type=EST; length=590bp
GGGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGT
GGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCT
TGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGC
CATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAG
GAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGAT
GACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGA
CTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAA
GTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGA
AAAGTGAAAACTATCCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGA
TGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATC
TCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTGT
CTTCTTTTCCCCACTTCTTTTTTGGGTTTGGGTTAAATGT
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