BQ623161

Overview
NameBQ623161
Unique NameBQ623161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length390
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1354 contig Csv1_Contig1354:117..506. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODPA1_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=At1g59900 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 1
Query:    1 MAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD---ELRDPAEKARYAARDPITALKKYLIESSLTSEAELK 381
            ++ALW LP + V ENN + +G +  RA   P  YK+G    +PG  VDGMD   V++  K A + A   +GP ++E +TYR+ GHS++DP      RD     R   RDPI  +KK ++   L +E ELK
Sbjct:  210 ISALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHALE-KGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVR-QERDPIERIKKLVLSHDLATEKELK 335          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ACOA_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha OS=Bacillus subtilis GN=acoA PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 1
Query:    1 MAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARY-AARDPITALKKYLIESS 357
            +AA+W LP+VFV ENN +        A++   I  +  A+ MPG  VDG D+L V + A+EAIERAR G GP+L+EC TYR  GH   D    +   E+  +   +D I   K YL++ +
Sbjct:  167 LAAVWNLPVVFVAENNGYGEATPFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYGHFEGDAQTYKTKDERVEHLEEKDAIQGFKNYLLKET 286          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODPA_PEA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.718e-19
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 1
Query:    1 MAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD---ELRDPAEKARYAARDPITALKKYLIESSLTSEAELK 381
            ++ALW LP + V ENN + +G +  R+   P  +K+G    +PG  VDGMD L V++  K A E A +  GP ++E +TYR+ GHS++DP      RD     R   RDPI  ++K L+   + +E ELK
Sbjct:  218 ISALWDLPAILVCENNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVR-QERDPIERVRKLLLSHDIATEKELK 343          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODPA2_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.718e-19
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 1
Query:    1 MAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD---ELRDPAEKARYAARDPITALKKYLIESSLTSEAELK 381
            ++ALW LP + V ENN + +G +  R+   P  +K+G    +PG  VDGMD L V++  K A E A +  GP ++E +TYR+ GHS++DP      RD     R   RDPI  ++K L+   + +E ELK
Sbjct:  214 ISALWDLPAILVCENNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVR-QVRDPIERVRKLLLTHDIATEKELK 339          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.718e-19
Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 1
Query:    4 AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDEL---RDPAEKARYAARDPITALKKYLIESSLTSE 369
            AA+ KLP++F+ ENN +AI + + +  +   I  +   +GMPG  V+G D L+V +  KEA ERARRGEGPTL+E  +YR   HS  D D     R+  E+A+ +  DP+   + YL E+ L S+
Sbjct:  169 AAVHKLPVIFMCENNKYAISVPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLTPHSSDDDDSSYRGREEVEEAKKS--DPLLTYQAYLKETGLLSD 291          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODPA_BACST (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus stearothermophilus GN=pdhA PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 4.083e-17
Identity = 49/126 (38.89%), Postives = 69/126 (54.76%), Query Frame = 1
Query:    4 AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA--DPDELRDPAEKARYAARDPITALKKYLIESSLTSEAE 375
            A  +K P +FVV+NN +AI     + T    + +K  A G+PG  VDGMD L V    K A ERA  GEGPTL+E   +R+  H+++  DP   R    +  +A +DP+   +K+L    L SE E
Sbjct:  189 AGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEE 314          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ACOA_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoA PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 1.552e-16
Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 1
Query:    1 MAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAA-RDPITALKKYLIESSLTSEAELKAI 387
            +AA+W LP++FV+ENN +A   S    T+      +   FG+PG  VDG D   V E A E I RAR G GP+L+EC+  RF GH   D    R   E     A +D +    + + ++ + +  EL  I
Sbjct:  170 LAAVWNLPVIFVIENNGYAESTSRDYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYGHFEGDAQTYRAAGELDDIRANKDCLKLFGRAVTQAGVVAREELDTI 299          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODPA_BACSU (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus subtilis GN=pdhA PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 3.457e-16
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1
Query:    4 AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA--DPDELRDPAEKARYAARDPITALKKYLIESSLTSEAE 375
            A  +K P +FVV+NN +AI     + ++   I +K  A G+ G  VDGMD L V     EA ERA  GEGPTL+E  T+R+  H++A  DP + R    +  +  +DP+   + +L    L SE E
Sbjct:  191 AGAYKAPAIFVVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTKYRTKEIENEWEQKDPLVRFRAFLENKGLWSEEE 316          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODPA_BACCE (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus cereus GN=pdhA PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 1.897e-14
Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 1
Query:    4 AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA--DPDELRDPAEKARYAARDPITALKKYLIESSLTS-EAELKAI 387
            A  +K P +FVV+NN +AI     + ++   + +K  A G+ G  VDGMD L V      A ERA  GEGPTL+E  T+R+  H++A  DP   R    +  +  +DPI   + +L    L S E E K I
Sbjct:  191 AGAFKAPAIFVVQNNRYAISTPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERAVNGEGPTLIETLTFRYGPHTMAGDDPTRYRTKDIENEWEQKDPIVRFRAFLENKGLWSQEVEEKVI 321          
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Match: ODBA_PSEPU (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida GN=bkdA1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.606e-13
Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 1
Query:    4 AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK-KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA-DPDELRDPAEKARYAARDPITALKKYLIESSLTSEAELKA 384
            A +++ P++  V NN WAI      A  +   +  +G   G+    VDG D + V   ++ A ERARRG GP+L+E  TYR   HS + DP + R   + + +   DPI  LK++LI+    SE E +A
Sbjct:  228 AHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQA 356          
The following BLAST results are available for this feature:
BLAST of BQ623161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
ODPA1_ARATH2.557e-1940.00Pyruvate dehydrogenase E1 component subunit alpha-... [more]
ACOA_BACSU2.557e-1940.83Acetoin:2,6-dichlorophenolindophenol oxidoreductas... [more]
ODPA_PEA9.718e-1939.23Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA2_ARATH9.718e-1939.23Pyruvate dehydrogenase E1 component subunit alpha-... [more]
ODBA_BACSU9.718e-1941.602-oxoisovalerate dehydrogenase subunit alpha OS=Ba... [more]
ODPA_BACST4.083e-1738.89Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ACOA_RALEH1.552e-1636.15Acetoin:2,6-dichlorophenolindophenol oxidoreductas... [more]
ODPA_BACSU3.457e-1638.10Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_BACCE1.897e-1437.40Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODBA_PSEPU1.606e-1335.662-oxoisovalerate dehydrogenase subunit alpha OS=Ps... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00252 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00252 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623161 ID=BQ623161; Name=BQ623161; organism=Citrus sinensis; type=EST; length=390bp
ATGGCTGCATTGTGGAAGTTGCCCATTGTGTTTGTTGTGGAGAACAACTT
GTGGGCTATTGGTATGTCACATCTAAGGGCTACTTCAGATCCTCAGATTT
ATAAAAAGGGACCAGCATTTGGGATGCCAGGTTTTCACGTTGATGGGATG
GATGTTTTGAAGGTGAGGGAAGTGGCTAAAGAGGCAATTGAAAGAGCTAG
GAGAGGTGAAGGACCAACATTGGTGGAATGTGAGACGTACAGGTTTAGAG
GACACTCATTGGCTGACCCTGATGAGCTTCGTGACCCAGCGGAGAAGGCT
CGTTATGCTGCTAGAGATCCAATTACTGCTTTGAAGAAATACTTGATCGA
GAGCAGTCTAACTAGTGAAGCAGAGCTCAAGGCTATTTAA
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