BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11 Identity = 43/162 (26.54%), Postives = 80/162 (49.38%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPP 581 ++ +T +TF + T+ +F + VDG+ L +WDTAGQE + L P YRGA +L + + + ++ + W+ EL Y I+ LVG K+D + + + +G + + + ++IE S+KT V+ F+ ++ ++Q P Sbjct: 25 LLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKENRE-----------VDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFEELVEKIIQTP 173
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB18_BOVIN (Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11 Identity = 43/162 (26.54%), Postives = 80/162 (49.38%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPP 581 ++ +T +TF + T+ +F + VDG+ L +WDTAGQE + L P YRGA +L + + + ++ + W+ EL Y I+ LVG K+D + + + +G + + + ++IE S+KT V+ F+ ++ ++Q P Sbjct: 25 LLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKENRE-----------VDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFEELVEKIIQTP 173
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11 Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 407 +T N F + T+ F+ V+G V +WDTAGQE Y + YRGA LL + + A++EN A +W+ ELR H P + ++L+G K DLR Sbjct: 33 FTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 131
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.955e-11 Identity = 41/150 (27.33%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 548 ++ +T F + T+ F A +V +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + + I+L+G K DL + + +GE + G +++E S+KT NV+ F Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLT-SWLEDARQHSSSNMVIMLIGNKSDLESRRD----------VKREEGEAFAREHGL-IFMETSAKTACNVEEAF 160 HSP 2 Score: 23.0978 bits (48), Expect = 5.955e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCL 22
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.958e-11 Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 ++ +T F + T+ F A ++ +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + I+L+G K DL ++ + +GE + G +++E S+KT NV+ F K + + Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESRRE----------VKKEEGEAFAREHGL-IFMETSAKTASNVEEAFINTAKEIYE 169 HSP 2 Score: 23.0978 bits (48), Expect = 5.958e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCL 22
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.958e-11 Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 ++ +T F + T+ F A ++ +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + I+L+G K DL ++ + +GE + G +++E S+KT NV+ F K + + Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESRRE----------VKKEEGEAFAREHGL-IFMETSAKTASNVEEAFINTAKEIYE 169 HSP 2 Score: 23.0978 bits (48), Expect = 5.958e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCL 22
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.958e-11 Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 ++ +T F + T+ F A ++ +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + I+L+G K DL ++ + +GE + G +++E S+KT NV+ F K + + Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESRRE----------VKKEEGEAFAREHGL-IFMETSAKTASNVEEAFINTAKEIYE 169 HSP 2 Score: 23.0978 bits (48), Expect = 5.958e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCL 22
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.958e-11 Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 ++ +T F + T+ F A ++ +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + I+L+G K DL ++ + +GE + G +++E S+KT NV+ F K + + Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESRRE----------VKKEEGEAFAREHGL-IFMETSAKTASNVEEAFINTAKEIYE 169 HSP 2 Score: 23.0978 bits (48), Expect = 5.958e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCL 22
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.958e-11 Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 ++ +T F + T+ F A ++ +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + I+L+G K DL ++ + +GE + G +++E S+KT NV+ F K + + Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESRRE----------VKKEEGEAFAREHGL-IFMETSAKTASNVEEAFINTAKEIYE 169 HSP 2 Score: 23.0978 bits (48), Expect = 5.958e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCL 22
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.958e-11 Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 ++ +T F + T+ F A ++ +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + I+L+G K DL ++ + +GE + G +++E S+KT NV+ F K + + Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESRRE----------VKKEEGEAFAREHGL-IFMETSAKTASNVEEAFINTAKEIYE 169 HSP 2 Score: 23.0978 bits (48), Expect = 5.958e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCL 22 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |