BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOB_HUMAN (Rho-related GTP-binding protein RhoB OS=Homo sapiens GN=RHOB PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.355e-37 Identity = 76/159 (47.80%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 +I ++ + FP YVPTVF+N+ A++ VDG V L LWDTAGQEDY+RLRPLSY DV L+ FS+ S S EN+ +KW+PE++H+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+KT++ V+ VF+ A + LQ Sbjct: 22 LIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOB_BOVIN (Rho-related GTP-binding protein RhoB OS=Bos taurus GN=RHOB PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.355e-37 Identity = 76/159 (47.80%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 +I ++ + FP YVPTVF+N+ A++ VDG V L LWDTAGQEDY+RLRPLSY DV L+ FS+ S S EN+ +KW+PE++H+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+KT++ V+ VF+ A + LQ Sbjct: 22 LIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.493e-36 Identity = 75/174 (43.10%), Postives = 110/174 (63.22%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFL--ADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKKRR 608 + + ++SYTSN+ +Y PTVFDN+S ++ + NL LWDTAGQE++++LR LSY DVFLL FSLI+ +S+ N+ W+ EL P PI+LVGT++DL+ + L +PI+T QG EL K I A ++ECS+ TQ+N+ VF+ AI K K+K++ Sbjct: 16 KTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALTQKNLHLVFEKAIDACEAHQKCQSKEKKK 189 HSP 2 Score: 23.0978 bits (48), Expect = 9.493e-36 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 56 IKCVTVGDGAVGKTCM 103 IK VG+G +GKT M Sbjct: 4 IKVCVVGEGGIGKTSM 19
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.292e-35 Identity = 73/174 (41.95%), Postives = 112/174 (64.37%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGA--VPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKKRR 608 + + ++ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + L+ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ L A PIT QG + I A +Y+ECS+K ++NV+ VF A KV L K +++K+R Sbjct: 32 KTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVEDVFREAAKVALSALKKAQRQKKR 205
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.292e-35 Identity = 72/173 (41.62%), Postives = 112/173 (64.74%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGA--VPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKKR 605 + + ++ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + L+ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ L A PIT QG+ + I A +Y+ECS+K ++NV+ VF A KV L K +++K+ Sbjct: 36 KTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGQSACEQIRAALYLECSAKFRENVEDVFREAAKVALSALKKAQRQKQ 208
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.688e-35 Identity = 77/173 (44.51%), Postives = 110/173 (63.58%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL------QPPKNTKKK 599 +I ++ TFP YVPTVF+N+ A+V VDG + L LWDTAGQEDY+RLRPLSY + V L+ FS+ + S +NV +KWI E+ H+ +PI+LVG K+DLR+D + + + PIT +G+ + + IGA Y+ECS+K + V VF+ A + + PK KKK Sbjct: 23 LIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARASMLKFKPASVPKTKKKK 195
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO_DISOM (Ras-like GTP-binding protein O-RHO OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.760e-35 Identity = 76/166 (45.78%), Postives = 106/166 (63.86%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD--KQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKK 596 +I ++ + FP YVPTVF+N+ A++ VDG V L LWDTAGQEDY+RLRPLSY DV L+ FS+ S S EN+ +KW PE++H+ P +PIILVG K D+ ++ LA P+ +E+ I A Y+ECS+KT++ V+ VF+ A + LQ K K Sbjct: 22 LIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNIPIILVGNKKTAGDEHTRRELAKMK-QEPVKPDDAKEMGSRIKAFGYLECSAKTKEGVREVFELASRAALQAKKTKSK 186
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.157e-34 Identity = 67/162 (41.36%), Postives = 105/162 (64.81%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 572 + + ++ + FP Y PTVF+ ++A + + G V+L +WDTAGQ+DY+RLRPL Y A+V LL F + + S++NV+ +W PE+ H+ GVPII+VG K+DLR DK + + P+T +G ++ + +GA Y+ECS++ NV+AVF A +V L Sbjct: 30 KTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEAAEVAL 191
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.092e-34 Identity = 70/173 (40.46%), Postives = 108/173 (62.43%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGA--VPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKKR 605 + + ++ Y +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + L+ + +++ SY+NV KW PE+ H+ G+P +L+G K DLR DK+ L A PIT QG + + +Y+ECS+K ++NV+ VF A KV L K +++K+ Sbjct: 32 KTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAKFRENVEDVFREAAKVALSALKKAQRQKK 204
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.092e-34 Identity = 70/157 (44.59%), Postives = 104/157 (66.24%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 572 +ISY TFPTDY+PT+F+N+ N+ +G + L LWDTAGQE+Y+RLRPLSY ADV ++ +S+ SK S +NV W PE++H+ P PI+LVG K DL + AD+ + + + E L K +GA +I+CS++ ++N+ VF+ AI +L Sbjct: 89 LISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDL-----YEADNLSDL-VEPSSAESLAKRLGAFAHIQCSARLKENIDEVFETAIHTLL 239 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |