BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RACM_DICDI (Rho-related protein racM OS=Dictyostelium discoideum GN=racM PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.942e-29 Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 3 Query: 105 VISYT-SNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 +++YT S +FP +YVPT DNF ++G +L +WDTAG E Y+ LRPL Y D+ LL F++ ++ S+ ++ WI E+ Y PG+PIILVGTK+DLR D + D V +G L K IGA + ECSS+ ++ +F IK+ N K Sbjct: 22 LMTYTASGSFPQEYVPTALDNFIHEATINGKKASLSIWDTAGGEYYHELRPLIYPETDILLLLFAIENRESFLHIKTNWITEINQYIPGIPIILVGTKIDLR-DSDLIKDKSNFVKY--KEGLALSKEIGASHFCECSSRMNLGLEELFKKVIKLTNNNNNNNNNNK 185 HSP 2 Score: 23.8682 bits (50), Expect = 1.942e-29 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 56 IKCVTVGDGAVGKTCM 103 IK VT+GD VGKT + Sbjct: 6 IKIVTIGDYGVGKTTL 21
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND3_RAT (Rho-related GTP-binding protein RhoE OS=Rattus norvegicus GN=Rnd3 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.551e-29 Identity = 61/167 (36.53%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSS-KTQQNVKAVFD-AAIKVVLQPPKNTKKKK 602 + + FP +YVPTVF+N++A+ +D + L LWDT+G Y+ +RPLSY +D L+ F + + ++V KKW E++ + P ++LVG K DLR D L + + P++ QG + K IGA YIECS+ +++ +V+ +F A + V + KN K+ K Sbjct: 43 FAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRNK 209 HSP 2 Score: 27.335 bits (59), Expect = 5.551e-29 Identity = 13/35 (37.14%), Postives = 19/35 (54.29%), Query Frame = 2 Query: 38 MSASRFIKC--VTVGDGAVGKTCMRHFLHQQHFPD 136 M ++ +KC V VGD GKT + H + FP+ Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPE 50
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND3_PONAB (Rho-related GTP-binding protein RhoE OS=Pongo abelii GN=RND3 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.551e-29 Identity = 61/167 (36.53%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSS-KTQQNVKAVFD-AAIKVVLQPPKNTKKKK 602 + + FP +YVPTVF+N++A+ +D + L LWDT+G Y+ +RPLSY +D L+ F + + ++V KKW E++ + P ++LVG K DLR D L + + P++ QG + K IGA YIECS+ +++ +V+ +F A + V + KN K+ K Sbjct: 43 FAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRNK 209 HSP 2 Score: 27.335 bits (59), Expect = 5.551e-29 Identity = 13/35 (37.14%), Postives = 19/35 (54.29%), Query Frame = 2 Query: 38 MSASRFIKC--VTVGDGAVGKTCMRHFLHQQHFPD 136 M ++ +KC V VGD GKT + H + FP+ Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPE 50
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND3_MOUSE (Rho-related GTP-binding protein RhoE OS=Mus musculus GN=Rnd3 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.551e-29 Identity = 61/167 (36.53%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSS-KTQQNVKAVFD-AAIKVVLQPPKNTKKKK 602 + + FP +YVPTVF+N++A+ +D + L LWDT+G Y+ +RPLSY +D L+ F + + ++V KKW E++ + P ++LVG K DLR D L + + P++ QG + K IGA YIECS+ +++ +V+ +F A + V + KN K+ K Sbjct: 43 FAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRNK 209 HSP 2 Score: 27.335 bits (59), Expect = 5.551e-29 Identity = 13/35 (37.14%), Postives = 19/35 (54.29%), Query Frame = 2 Query: 38 MSASRFIKC--VTVGDGAVGKTCMRHFLHQQHFPD 136 M ++ +KC V VGD GKT + H + FP+ Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPE 50
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND3_HUMAN (Rho-related GTP-binding protein RhoE OS=Homo sapiens GN=RND3 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.551e-29 Identity = 61/167 (36.53%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSS-KTQQNVKAVFD-AAIKVVLQPPKNTKKKK 602 + + FP +YVPTVF+N++A+ +D + L LWDT+G Y+ +RPLSY +D L+ F + + ++V KKW E++ + P ++LVG K DLR D L + + P++ QG + K IGA YIECS+ +++ +V+ +F A + V + KN K+ K Sbjct: 43 FAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRNK 209 HSP 2 Score: 27.335 bits (59), Expect = 5.551e-29 Identity = 13/35 (37.14%), Postives = 19/35 (54.29%), Query Frame = 2 Query: 38 MSASRFIKC--VTVGDGAVGKTCMRHFLHQQHFPD 136 M ++ +KC V VGD GKT + H + FP+ Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPE 50
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 71/187 (37.97%), Postives = 109/187 (58.29%), Query Frame = 3 Query: 87 SARLACVISYTSNTFPTDYVPTVFDNFSANVVVD-GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDL--RDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL-----QPPKN-----TKKKKRR 608 + + + ++SYT FP DYVPT+F+N+ N+ G + L LWDTAGQE+Y+RLRPLSY D+ ++ ++ ++ S N + W PE+RH+ P P++LVG K DL D L D A E + + +GA V+++CS+KT+Q ++ VF+ AI L PP+ KKK++R Sbjct: 63 TGKTSLLMSYTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTSLTNAEELWFPEVRHFCPHAPMMLVGLKSDLYSLDALDRLVDPTDA--------ELVARKMGAFVHLQCSAKTRQCLEDVFNTAIHTALYDELRAPPQRGVKGMFKKKQQR 241
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28 Identity = 62/164 (37.80%), Postives = 100/164 (60.98%), Query Frame = 3 Query: 87 SARLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGV--PIILVGTKLDLRDDK---QFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 563 + + +++Y++ +FPT YVP+ D S ++ + ++G WD++ +++ RP +Y +V +L FS+ S S+ENV+KKWIPE+R YAP + PIIL+GTK DLR+D+ L ++ PI+ QG L K I A +Y+ECSS Q V +F ++ Sbjct: 16 TGKTTMMMTYSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPEIRQYAPSIHTPIILLGTKCDLREDENTINLLKENNQMPPISYKQGLALSKEIKATMYLECSSLCNQGVNEIFKQVVR 179
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.793e-28 Identity = 59/155 (38.06%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 569 +++++ PT YVPTVF+NFS + L LWDTAGQE+Y+RLRPLSY +DV LL F++ ++ S++N++ KW PE++H + +IL K+DLR D ++D +T +G++L + +G YIE SS + + VF+ ++ + Sbjct: 37 LLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKH----LYLILQRLKVDLRKD---VSD-----DVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCI 179 HSP 2 Score: 30.8018 bits (68), Expect = 7.793e-28 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 41 SASRFIKCVTVGDGAVGKTCM 103 + + +K V VGDGAVGKTC+ Sbjct: 16 NGKKALKIVVVGDGAVGKTCL 36
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.295e-27 Identity = 58/170 (34.12%), Postives = 103/170 (60.59%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 + + ++ +TS TFP Y PTV++N +V +DG ++LGLWDTAG + + +RPLSY+ ADV L+ +S+ + S+ N+ KWI E+R P P+++V T+ D R+ + H + I +G+ L + + A Y+ECS+ + + V+ VF+ A++ + + ++K Sbjct: 17 KTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQRE----VGPHRASC-INAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRK 181
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.886e-27 Identity = 56/170 (32.94%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 + + ++ +TS TFP Y PTV++N +V +DG ++LGLWDTAG + + +RPLSY+ ADV L+ +S+ + S+ N+ KWI E+R P P+++V T+ D R+ + H + + +G++L + + A Y+ECS+ + + V+ VF+ A++ + + +++ Sbjct: 17 KTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQRE----MGPHRASC-VNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRR 181 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |