BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: CDC42_PIG (Cell division control protein 42 homolog OS=Sus scrofa GN=CDC42 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.432e-44 Identity = 85/168 (50.60%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 +ISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVFL+ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD + PIT E+L + + A Y+ECS+ TQ+ +K VFD AI L+PP+ K+K Sbjct: 20 LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILSALEPPETQPKRK 187
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: CDC42_RAT (Cell division control protein 42 homolog OS=Rattus norvegicus GN=Cdc42 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 7.559e-44 Identity = 84/168 (50.00%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 +ISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVFL+ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD + PIT E+L + + A Y+ECS+ TQ+ +K VFD AI L+PP+ K ++ Sbjct: 20 LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRR 187
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: CDC42_BOVIN (Cell division control protein 42 homolog OS=Bos taurus GN=CDC42 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.559e-44 Identity = 84/168 (50.00%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 +ISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVFL+ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD + PIT E+L + + A Y+ECS+ TQ+ +K VFD AI L+PP+ K ++ Sbjct: 20 LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRR 187
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: CDC42_CHICK (Cell division control protein 42 homolog OS=Gallus gallus GN=CDC42 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 9.872e-44 Identity = 84/168 (50.00%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 +ISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVFL+ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD + PIT E+L + + A Y+ECS+ TQ+ +K VFD AI L+PP+ K ++ Sbjct: 20 LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKTRR 187
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOJ_HUMAN (Rho-related GTP-binding protein RhoJ OS=Homo sapiens GN=RHOJ PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.872e-43 Identity = 87/170 (51.18%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKKRR 608 ++SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVFL+ FS+++ ASY NV ++W+PEL+ P VP +L+GT++DLRDD + LA + P+T G +L K IGA Y+ECS+ TQ+ +KAVFD AI + P KKKK+R Sbjct: 38 LMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAILTIFHP----KKKKKR 203
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: CDC42_MACFA (Cell division control protein 42 homolog OS=Macaca fascicularis GN=CDC42 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.872e-43 Identity = 83/168 (49.40%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 +ISYT+N FP++YVPTVF+N++ V++ G LGL+DTAGQEDY+RLRPLSY DVFL+ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD + PIT E+L + + A Y+ECS+ TQ+ +K VFD AI L+PP+ K ++ Sbjct: 20 LISYTTNKFPSEYVPTVFNNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRR 187
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOU_HUMAN (Rho-related GTP-binding protein RhoU OS=Homo sapiens GN=RHOU PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.212e-43 Identity = 85/177 (48.02%), Postives = 119/177 (67.23%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFL--ADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ---PPKNTKKKKRR 608 + + V+SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y D+FLL FS++S +S++NV++KW+PE+R + P PIILVGT+ DLR+D + L D P+ + + I A YIECS+ TQ+N+K VFDAAI +Q + KK K R Sbjct: 62 KTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSR 238 HSP 2 Score: 31.187 bits (69), Expect = 3.212e-43 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 50 RFIKCVTVGDGAVGKTCM 103 R +KCV VGDGAVGKT + Sbjct: 48 RGVKCVLVGDGAVGKTSL 65
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOU_MOUSE (Rho-related GTP-binding protein RhoU OS=Mus musculus GN=Rhou PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 5.454e-43 Identity = 83/177 (46.89%), Postives = 117/177 (66.10%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFL--ADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ------PPKNTKKK 599 + + V+SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y D+FLL FS++S S++NV +KW+PE+R + P PIILVGT+ DLR+D + L D P+ + + + A YIECS+ TQ+N+K VFDAAI +Q PK +K + Sbjct: 65 KTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPEIRRHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEVKAVSYIECSALTQKNLKEVFDAAIVAGIQHSDSQLQPKKSKSR 241 HSP 2 Score: 31.187 bits (69), Expect = 5.454e-43 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 50 RFIKCVTVGDGAVGKTCM 103 R +KCV VGDGAVGKT + Sbjct: 51 RGVKCVLVGDGAVGKTSL 68
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 7.109e-43 Identity = 82/173 (47.40%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFL--ADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKKR 605 + + V+SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y AD+FLL FS++ +S++NV++KW+PE+R + P PIILVGT+ DLR+D + L D P+ + I A YIECS+ TQ+N+K VFDAAI +Q + ++ K+ Sbjct: 59 KTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSALTQKNLKEVFDAAIVAGIQYSDSQQQPKK 231 HSP 2 Score: 30.4166 bits (67), Expect = 7.109e-43 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 56 IKCVTVGDGAVGKTCM 103 +KCV VGDGAVGKT + Sbjct: 47 VKCVLVGDGAVGKTSL 62
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOJ_MOUSE (Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 8.358e-43 Identity = 84/165 (50.91%), Postives = 115/165 (69.70%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTK 593 ++SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVFL+ FS+++ ASY NV ++W+PEL+ P VP +L+GT++DLRDD + LA + P+T G +L K IGA Y+ECS+ TQ+ +KAVFD AI + P K K Sbjct: 38 LMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAILTIFHPKKKKK 202 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |