BQ623191

Overview
NameBQ623191
Unique NameBQ623191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig383 contig Csv1_Contig383:27..546. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_BURVG (Chaperone protein dnaJ OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V  +A+++EI+  Y +LA+K+HPD+  D   A   F+E  EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_BURTA (Chaperone protein dnaJ OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V  +A+++EI+  Y +LA+K+HPD+  D   A   F+E  EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDSQKRAAYDQYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_ALISL (Chaperone protein dnaJ OS=Aliivibrio salmonicida (strain LFI1238) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +D+Y++L V  DA+E +I+  Y RLA+K+HPD+ +  + A  +F+E+  AY++L+D  KR  YD  G
Sbjct:    4 RDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDETAPEKFKEVKVAYEILTDAQKRAAYDQYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DJB14_XENLA (DnaJ homolog subfamily B member 14 OS=Xenopus laevis GN=dnajb14 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  100 DFLSLLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            D +  + K K YY++L V  DA EE+++  Y +LALK+HPDK      AT  F++I  AY VLS+P KR++YD  G
Sbjct:   92 DGVQRIKKCKTYYEVLGVSPDAGEEDLKKAYRKLALKFHPDK-NHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTG 166          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: CBPA_COXBU (Curved DNA-binding protein OS=Coxiella burnetii GN=cbpA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYYKIL V  DAT +EI+ +Y +LA K+HPD   + + A  +F+++ EAY+VL D  KR+ YD+ G
Sbjct:    4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPN-AEEKFKQVKEAYEVLKDVEKRKAYDAIG 69          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: CBPA_COXBR (Curved DNA-binding protein OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=cbpA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYYKIL V  DAT +EI+ +Y +LA K+HPD   + + A  +F+++ EAY+VL D  KR+ YD+ G
Sbjct:    4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPN-AEEKFKQVKEAYEVLKDVEKRKAYDAIG 69          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: CBPA_COXBN (Curved DNA-binding protein OS=Coxiella burnetii (strain Dugway 5J108-111) GN=cbpA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYYKIL V  DAT +EI+ +Y +LA K+HPD   + + A  +F+++ EAY+VL D  KR+ YD+ G
Sbjct:    4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPN-AEEKFKQVKEAYEVLKDVEKRKAYDAIG 69          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDK-----QKDRDCATSRFQEINEAYQVLSDPVKRREYD 318
            KDYYKIL V  +A E EI+  Y +LAL++HPDK     ++++  A   F++I EAY VLSD  K+R+YD
Sbjct:  360 KDYYKILGVSKEAGETEIKKAYRKLALQYHPDKNNQLPEEEKAQAEKMFKDIGEAYSVLSDEKKKRQYD 428          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  130 DYYKILEVDYDATEEEIRSNYIRLALKWHPDKQ-KDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            DYY++L V   A+ E+I+  Y +LALKWHPDK  ++++ A  +F+++ EAY+VLSD  KR  YD  G
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYG 69          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  130 DYYKILEVDYDATEEEIRSNYIRLALKWHPDKQ-KDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            DYY++L V   A+ E+I+  Y +LALKWHPDK  ++++ A  +F+++ EAY+VLSD  KR  YD  G
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYG 69          
The following BLAST results are available for this feature:
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
DNAJ_BURVG5.982e-1144.78Chaperone protein dnaJ OS=Burkholderia vietnamiens... [more]
DNAJ_BURTA5.982e-1144.78Chaperone protein dnaJ OS=Burkholderia thailandens... [more]
DNAJ_ALISL5.982e-1141.79Chaperone protein dnaJ OS=Aliivibrio salmonicida (... [more]
DJB14_XENLA5.982e-1146.05DnaJ homolog subfamily B member 14 OS=Xenopus laev... [more]
CBPA_COXBU5.982e-1147.76Curved DNA-binding protein OS=Coxiella burnetii GN... [more]
CBPA_COXBR5.982e-1147.76Curved DNA-binding protein OS=Coxiella burnetii (s... [more]
CBPA_COXBN5.982e-1147.76Curved DNA-binding protein OS=Coxiella burnetii (s... [more]
DNJC7_DICDI7.813e-1149.28DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
DNJB6_PONAB7.813e-1147.76DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA7.813e-1147.76DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00282 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00282 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623191 ID=BQ623191; Name=BQ623191; organism=Citrus sinensis; type=EST; length=520bp
GTTTGTGTCCCCTCTACTAAAGAGGTCATGATGTGGGACGAATGGGTCGA
TTGCAACAATAACGATGAACAAACCCAACAGGATTCCCATGTCAATTTTG
ATTTTCTTTCTCTTCTCGCCAAACCCAAGGATTATTATAAAATATTGGAA
GTTGATTACGATGCCACGGAGGAAGAAATTAGGTCCAATTACATTCGTCT
AGCGCTGAAATGGCACCCAGATAAGCAAAAGGATCGAGATTGTGCAACTT
CGAGATTTCAAGAGATAAACGAGGCTTACCAGGTTTTGAGCGATCCTGTC
AAAAGGAGAGAATATGACAGCAAAGGGATGTTGCACATATATGATCGCAA
CATAATTGAGTATCTTAATCGCTACAAGGGCTTAATATTAACTTGCAATG
GTCTTGGGATGAGGCATTCAATTGTGTAATATGTTGTCAGCACAGTTGGG
GCAGTTCATATTGGGAGGCATAGAATTACCAATGCTGCAAATAGCATTGA
GGGCATGGAGAATAGCAGTT
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