BQ623197

Overview
NameBQ623197
Unique NameBQ623197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6338 contig Csv1_Contig6338:59..693. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  220 FPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  220 FPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16
Identity = 51/117 (43.59%), Postives = 64/117 (54.70%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKS----QPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQ 340
            F GE DE PD    DI FVL +K HP F R GDDL ++  LSL EAL GF   I+ +DG++L + S    QPG  +    F      GMP+ + P  RG + I   V FP  L+P Q
Sbjct:  262 FAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGF------GMPLPKNPSQRGNMIIECKVKFPTELTPAQ 372          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16
Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVL 364
            F  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     ++V P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  196 FEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDR--LLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.243e-16
Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVL 364
            F  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     +++ P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  196 FEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDR--LLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.102e-15
Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 2
Query:    8 GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF-QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTD 394
            G ADEA     GD++  L QK HP F+R GDDL  +  +SL EAL GF + ++T LDGR L      G+++ P     I  EGM    +  +RG LY+   ++FP+   +   + ++L  +LP    V + D
Sbjct:  240 GMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILRDILPSIPKVSVMD 371          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES-LSPDQCKMLETVLPPRT 376
            F GE +   +   GD+ F ++ ++HP+F+RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++ LS +Q   +  +L   T
Sbjct:  223 FHGEGEPHIEGDPGDLKFKIRIQKHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGH--IVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEILQQNT 346          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 346
            F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 346
            F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.762e-14
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 346
            F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
The following BLAST results are available for this feature:
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
DNJB1_HUMAN2.933e-1739.34DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_BOVIN2.933e-1739.34DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
PSI1_SCHPO1.115e-1643.59Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DJB13_MOUSE1.901e-1634.71DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DJB13_HUMAN3.243e-1633.88DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
XDJ1_SCHPO2.102e-1536.36DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
DNJ20_CAEEL2.745e-1537.30DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
DJB11_PONAB3.964e-1435.65DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN3.964e-1435.65DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]
DJB11_CANFA6.762e-1435.65DnaJ homolog subfamily B member 11 OS=Canis famili... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00288 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00288 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623197 ID=BQ623197; Name=BQ623197; organism=Citrus sinensis; type=EST; length=635bp
GTTCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTG
TATTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGAT
GACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTT
TCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCCTCATCAAATCCC
AGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCCATAAATGATGAA
GGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTACATTCA
TTTCAGTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGC
TGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGATATGGAA
CTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGAGGAGGA
AATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAGATGACG
ATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGT
AGAAGAAAAGGGGTGGCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAA
GATTCTCAACATATTTATTTTCTGGTATAGGCTTT
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