BQ623224

Overview
NameBQ623224
Unique NameBQ623224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E DE P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  209 KEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E DE P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  209 KEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.864e-21
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E DE P+++  DIVFV++ KEHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  209 KEGTKITFPREGDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.864e-21
Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E DE P ++  DIVFV++ K+HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  209 KEGTKITFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20
Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  220 KEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20
Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  220 KEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20
Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  220 KEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  213 KEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVLP 339
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  213 KEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339
[Close]
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 2 
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  213 KEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339
The following BLAST results are available for this feature:
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
DNJB4_PONAB3.755e-2241.09DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN3.755e-2241.09DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_MOUSE1.864e-2141.09DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_BOVIN1.864e-2141.09DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB5_MOUSE1.208e-2041.09DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN1.208e-2041.09DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN1.208e-2041.09DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB1_MOUSE1.744e-1940.31DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNJB1_HUMAN1.744e-1940.31DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_BOVIN1.744e-1940.31DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00315 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623224 ID=BQ623224; Name=BQ623224; organism=Citrus sinensis; type=EST; length=621bp
GCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGCTGATGAAGCGCCCG
ACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCCG
AAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCACT
GACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGGATGGCC
GGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAA
TTCAAGGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTAT
GAGGGGCAAACTGTACATTCATTTCACTGTTGACTTCCCTGAGTCACTGA
GCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGACCTCA
GTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAACCCTGCA
TGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAGG
AGGCATACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAGTGCAG
TGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTTAGTAT
TTTCATTGTTTGGGAGAAAAA
back to top