BQ623224

Overview
NameBQ623224
Unique NameBQ623224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 2
Query:    8 GQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 388
            G KITFP E D AP+    DIVF+++ K H  FKR+G DL     +SL +ALCG    +  L G ++ +     E++KP   + IN  G+P+ + P  RG L + F + FP++L+P     L  +LP
Sbjct:  208 GTKITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPN-HEIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLSELLP 333          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19
Identity = 46/153 (30.07%), Postives = 85/153 (55.56%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 460
            ++G++I   G+  E P    GD++  +++K +  FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  255 RDGERIMLQGQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.519e-18
Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 385
            + G +ITF  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     ++V P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  189 RQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDR--LLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 54/122 (44.26%), Postives = 67/122 (54.92%), Query Frame = 2
Query:    8 GQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKS----QPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQ 361
            G KI F GE DE PD    DI FVL +K HP F R GDDL ++  LSL EAL GF   I+ +DG++L + S    QPG  +    F      GMP+ + P  RG + I   V FP  L+P Q
Sbjct:  257 GTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGF------GMPLPKNPSQRGNMIIECKVKFPTELTPAQ 372          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 385
            + G +ITF  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     +++ P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  189 RQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDR--LLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16
Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 2
Query:    5 NGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES-LSPDQCKMLETVLPPRT 397
            NG +  F GE +   +   GD+ F ++ ++HP+F+RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++ LS +Q   +  +L   T
Sbjct:  217 NGHQQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGH--IVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEILQQNT 346          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.959e-16
Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF-QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTD 415
            +   KI   G ADEA     GD++  L QK HP F+R GDDL  +  +SL EAL GF + ++T LDGR L      G+++ P     I  EGM    +  +RG LY+   ++FP+   +   + ++L  +LP    V + D
Sbjct:  231 KENDKIIQRGMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILRDILPSIPKVSVMD 371          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.959e-16
Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 2
Query:    8 GQKITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 376
            G KIT+  + D  P T     + FV+Q+K HP FKR GDDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P  RG L + + VD+P SL+  Q + ++
Sbjct:  228 GTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 349          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.584e-15
Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 367
            ++G +  F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  217 RDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.584e-15
Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 367
            ++G +  F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  217 RDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
The following BLAST results are available for this feature:
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
DNAJ1_DROME1.744e-1938.58DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJA1_DICDI5.075e-1930.07DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DJB13_MOUSE2.519e-1835.16DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
PSI1_SCHPO4.297e-1844.26Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DJB13_HUMAN4.297e-1834.38DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
DNJ20_CAEEL3.079e-1637.12DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
XDJ1_SCHPO8.959e-1635.46DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
SIS1_YEAST8.959e-1640.00Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DJB11_PONAB7.584e-1534.43DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN7.584e-1534.43DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00315 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623224 ID=BQ623224; Name=BQ623224; organism=Citrus sinensis; type=EST; length=621bp
GCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGCTGATGAAGCGCCCG
ACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCCG
AAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCACT
GACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGGATGGCC
GGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAA
TTCAAGGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTAT
GAGGGGCAAACTGTACATTCATTTCACTGTTGACTTCCCTGAGTCACTGA
GCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGACCTCA
GTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAACCCTGCA
TGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAGG
AGGCATACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAGTGCAG
TGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTTAGTAT
TTTCATTGTTTGGGAGAAAAA
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