BQ623224

Overview
NameBQ623224
Unique NameBQ623224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.294e-14
Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 367
            ++G +  F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  217 RDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB11_RAT (DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.207e-14
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 367
            ++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  217 RDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB11_MOUSE (DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.207e-14
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 367
            ++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  217 RDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 2
Query:    2 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP-ESLSPDQCKMLETVL 385
            ++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP E LS +  + ++ +L
Sbjct:  217 RDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLSEEAREGIKQLL 343          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNAJ_BARQU (Chaperone protein dnaJ OS=Bartonella quintana GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12
Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 2
Query:    2 QNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 376
            ++G +I   GE D        GD+   L  K H  F+R+G DL     LS+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH T++ P+ L+ +Q ++L+
Sbjct:  225 EDGTRIRLSGEGDAGIRGGPNGDLYIFLSVKPHEFFQREGADLHCRIPLSMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: SPJ1_SCHPO (DnaJ-related protein spj1 OS=Schizosaccharomyces pombe GN=spj1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 2
Query:    8 GQKITFPGEADEAPDTVTGDIVFVLQQKEHPK-FKRKGDDLFVEHTLSLTEALCG-FQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY-----QRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDE 430
            G +I F G+ADE P    GDI+ +L+       + RK +DL+ + T+S+ EAL G ++  I  LDG  + +K   GEVV P + + + ++GMP+Y     +     G  YI + V FP+ L     K L  +       +  D E DE
Sbjct:  239 GYRIGFRGKADEIPGMEAGDIIVILEAAGGDYGWTRKDNDLYRKETISVREALLGNWKRKIQKLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNLHKGKTTSAHGSAYIEWEVKFPKKLKGKFLKDLNNLF------EKYDNEFDE 380          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNAJ_BARHE (Chaperone protein dnaJ OS=Bartonella henselae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 2
Query:    2 QNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 376
            ++  +I   GE D       +GD+   L  K H  F+R+G DL     +S+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH T++ P+ L+ +Q ++L+
Sbjct:  225 EDSTRIRLSGEGDAGIRGGPSGDLYIFLSVKPHEFFQREGADLHCRVPISMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 45/147 (30.61%), Postives = 68/147 (46.26%), Query Frame = 2
Query:    8 GQKITFPGEADEAPDTVTGDIVFVLQQKEHPKF---------------------------KRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 367
            G    F GE +   +   GD+ F ++ ++HP+F                           +RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++   D+ K
Sbjct:  218 GHTQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFLISVTGIEIIELKVDELVELLLEGIRFERKGDDLYTNVTISLQDALNGFEMEILHLDGH--MVKVQRDKVTWPGARLRKKDEGMPSMENNNKKGMLIVTFDVEFPKTELTDEQK 362          
The following BLAST results are available for this feature:
BLAST of BQ623224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
DJB11_CANFA1.294e-1434.43DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
DJB11_RAT2.207e-1435.25DnaJ homolog subfamily B member 11 OS=Rattus norve... [more]
DJB11_MOUSE2.207e-1435.25DnaJ homolog subfamily B member 11 OS=Mus musculus... [more]
DJB11_BOVIN8.385e-1434.88DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
DNAJ_BARQU4.601e-1234.13Chaperone protein dnaJ OS=Bartonella quintana GN=d... [more]
SPJ1_SCHPO7.848e-1233.11DnaJ-related protein spj1 OS=Schizosaccharomyces p... [more]
DNAJ_BARHE2.982e-1132.54Chaperone protein dnaJ OS=Bartonella henselae GN=d... [more]
DNJ20_CAEBR6.644e-1130.61DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00315 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623224 ID=BQ623224; Name=BQ623224; organism=Citrus sinensis; type=EST; length=621bp
GCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGCTGATGAAGCGCCCG
ACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCCG
AAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCACT
GACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGGATGGCC
GGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAA
TTCAAGGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTAT
GAGGGGCAAACTGTACATTCATTTCACTGTTGACTTCCCTGAGTCACTGA
GCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGACCTCA
GTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAACCCTGCA
TGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAGG
AGGCATACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAGTGCAG
TGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTTAGTAT
TTTCATTGTTTGGGAGAAAAA
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