BQ623225

Overview
NameBQ623225
Unique NameBQ623225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12127 contig Csv1_Contig12127:460..1097. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_RAT (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Rattus norvegicus GN=Adi1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.237e-65
Identity = 116/180 (64.44%), Postives = 137/180 (76.11%), Query Frame = 1
Query:   61 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEA 600
            ++QAWYMD+S  D R+PH   P   V L+QL  LGVL W+LDAD YE D EL++IR+ R YS+MD   +C + LPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD  +KWIRI ++KG MI LPAG YHRFTLD  NY+KAMRLFVG+PVWTP+NRP DH  AR  YV+ FL+  A
Sbjct:    1 MVQAWYMDESTADPRMPHRAQPDRPVGLEQLRTLGVLYWKLDADKYENDPELEQIRKTRNYSWMDIITICKDSLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRPADHFDARVQYVK-FLEGTA 179          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_MOUSE (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Mus musculus GN=Adi1 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.816e-65
Identity = 117/180 (65.00%), Postives = 137/180 (76.11%), Query Frame = 1
Query:   61 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEA 600
            ++QAWYMD+S  D R PH   P   VSL+QL  LGVL W+LDAD YE D EL+KIR+ R YS+MD   +C + LPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD  +KWIRI ++KG MI LPAG YHRFTLD  NY+KAMRLFVG+PVWTP+NRP DH  AR  Y+ +FL+  A
Sbjct:    1 MVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRPADHFDARVQYM-SFLEGTA 179          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_CHICK (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Gallus gallus GN=ADI1 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.816e-65
Identity = 117/180 (65.00%), Postives = 140/180 (77.78%), Query Frame = 1
Query:   61 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEA 600
            +++AWYMD+S EDQR PH   P   VSL+QL  LGV   RLDADNYETD  LK+IRE   YS+MD   +  +KLPNYEEKIK F+EEHLH D+EIRY + GSGYFDVRD ++KWIRI ++KG MI LPAG YHRFTLD +NY+KAMRLFVG+PVWT +NRP D  PARK Y++ FL +EA
Sbjct:    1 MVEAWYMDESQEDQRAPHRLQPNRAVSLEQLRRLGVAYRRLDADNYETDPRLKEIREAENYSWMDIVTIHKDKLPNYEEKIKTFYEEHLHLDDEIRYILDGSGYFDVRDKDDKWIRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLFVGEPVWTAYNRPADDFPARKQYMK-FLAEEA 179          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_XENTR (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Xenopus tropicalis GN=adi1 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 8.501e-65
Identity = 112/177 (63.28%), Postives = 140/177 (79.10%), Query Frame = 1
Query:   61 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQ 591
            ++QAWYMDDS EDQR PHH  P++ VSL+QL  +GV S+ LDAD YE+D EL KIR++  Y++MD   +  + LPNYEEK+K F+EEHLH D+EIRY + GSGYFDVRD  ++WIRI+++KG MI LPAG YHRFTLD +NY+KAMRLFVGDPVWTP+NRP D+  AR+ YVQ   Q
Sbjct:    1 MVQAWYMDDSTEDQRKPHHLQPEQPVSLEQLKAVGVHSFSLDADRYESDPELAKIRQENNYTWMDIITIHKDTLPNYEEKLKIFYEEHLHLDDEIRYILEGSGYFDVRDKEDRWIRIFMQKGDMITLPAGIYHRFTLDENNYVKAMRLFVGDPVWTPYNRPADNFEAREKYVQFLTQ 177          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_HUMAN (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Homo sapiens GN=ADI1 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.230e-64
Identity = 111/177 (62.71%), Postives = 134/177 (75.71%), Query Frame = 1
Query:   61 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQ 591
            ++QAWYMDD+  D R PH  DP   V L+QL  LGVL W+LDAD YE D EL+KIR +R YS+MD   +C +KLPNYEEKIK F+EEHLH D+EIRY + GSGYFDVRD  ++WIRI+++KG M+ LPAG YHRFT+D  NY KAMRLFVG+PVWT +NRP DH  AR  YV+   Q
Sbjct:    1 MVQAWYMDDAPGDPRQPHRPDPGRPVGLEQLRRLGVLYWKLDADKYENDPELEKIRRERNYSWMDIITICKDKLPNYEEKIKMFYEEHLHLDDEIRYILDGSGYFDVRDKEDQWIRIFMEKGDMVTLPAGIYHRFTVDEKNYTKAMRLFVGEPVWTAYNRPADHFEARGQYVKFLAQ 177          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_XENLA (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Xenopus laevis GN=adi1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.315e-62
Identity = 112/177 (63.28%), Postives = 135/177 (76.27%), Query Frame = 1
Query:   61 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQ 591
            ++QAWYMDDS EDQR PH       VSL+QL  LGV S  LDAD YE+D EL KIR++  Y++MD   +  + +PNYEEK+K F+EEHLH D+EIRY + GSGYFDVRD  +KWIRI+++KG MI LPAG YHRFTLD +NY+KAMRLFVGDPVWTPFNRP D+  AR+ YVQ   Q
Sbjct:    1 MVQAWYMDDSAEDQRKPHRLQQDVPVSLEQLKALGVDSLSLDADRYESDPELAKIRKENNYTWMDIITIHKDTMPNYEEKLKIFYEEHLHLDDEIRYILEGSGYFDVRDQKDKWIRIFMQKGDMITLPAGIYHRFTLDENNYVKAMRLFVGDPVWTPFNRPADNCEAREKYVQFLAQ 177          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_DANRE (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Danio rerio GN=adi1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.086e-59
Identity = 104/175 (59.43%), Postives = 130/175 (74.29%), Query Frame = 1
Query:   61 VIQAWYMDD-SDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQN 582
            V +AWYMD+ S EDQRLPH   P + VS+ QL  +GV  W+L+AD YE D EL+KIRE++GYS+MD   + P+KLP+Y+ K+K F+EEHLH D+EIRY + GS YFDVRD  ++WIRI V KG +I LPAG YHRFT+D  NY KAMRLFVG+PVW  +NRP D    RK YV +
Sbjct:    3 VFEAWYMDEESGEDQRLPHKLSPNQPVSVQQLEHIGVFHWKLNADIYENDPELQKIREEKGYSFMDIITIHPDKLPDYQNKLKMFYEEHLHLDDEIRYILEGSSYFDVRDEGDRWIRIAVSKGDLITLPAGIYHRFTVDESNYTKAMRLFVGEPVWKAYNRPADDFDIRKEYVNS 177          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: ARD4_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Oryza sativa subsp. japonica GN=ARD4 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.028e-58
Identity = 97/170 (57.06%), Postives = 131/170 (77.06%), Query Frame = 1
Query:   73 WYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQN 582
            W + ++ E++     ++P E + L +L E+GVL W LD    E++EEL KIR +RGYSY D  E+CP+KL NYEEK+K+F+ EH+H DEEIRYC+ GSGYFDVRD ++KWIRIW+K+G MI+LPAG YHRF +D++NYIK MRLF+G+PVWT +NRP +  P R+ YV+N
Sbjct:    6 WMLGENGEEKSF---ENPNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYSYFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEGDMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKN 172          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_DROME (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Drosophila melanogaster GN=CG32068 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 1.839e-51
Identity = 92/182 (50.55%), Postives = 127/182 (69.78%), Query Frame = 1
Query:   61 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQL-SELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYV----QNFLQ 591
            ++Q WYMD  + DQRL HH++P  ++ LD L  + GV  ++++AD Y++D  L ++R  RGY+Y D      + LP+Y  K+K FF EHLHTDEEIR  + GSGYFDVRD+ + W+RI V KG +I++PAG YHRFTLDT+N+I+  R FVG+PVW P NRP D +  RK Y+    +NF+Q
Sbjct:    1 MVQVWYMDTEETDQRLEHHRNPPAYLELDDLYQKTGVEYFKINADEYQSDNTLTELRAKRGYTYDDEITCSEKCLPDYANKLKAFFTEHLHTDEEIRLILEGSGYFDVRDNEDNWLRIKVVKGDLIIIPAGIYHRFTLDTNNFIRTRRYFVGEPVWAPHNRPADEMDCRKSYIKHQSENFVQ 182          
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Match: MTND_YEAST (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Saccharomyces cerevisiae GN=ADI1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.729e-33
Identity = 76/173 (43.93%), Postives = 111/173 (64.16%), Query Frame = 1
Query:   76 YMDDS--DEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDHN--EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPH--DHLPARKGYV 576
            Y+ D+  D D R PH+   +  +SLD+L++LGV+ ++  A+  E +E + + RE +    ++ CE   +    + EK+  F++EHLH DEEIRYC+ G+GYFDVRD +  E WIR  V+ G +++LP G YHRFTL T N+IKA+RLF  +P W   NR +  D LP RK Y+
Sbjct:    5 YIHDNKVDSDYRAPHNSGTE--LSLDELAKLGVI-YKYCANEEEVNE-IARQREYKNRDVVNICEGSFKSEAEFNEKLATFYQEHLHEDEEIRYCLEGAGYFDVRDASTPENWIRCLVESGDLLILPPGIYHRFTLTTSNHIKALRLFKDEPKWQAINRSNQADSLPVRKDYI 173          
The following BLAST results are available for this feature:
BLAST of BQ623225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
MTND_RAT2.237e-6564.441,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_MOUSE3.816e-6565.001,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_CHICK3.816e-6565.001,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_XENTR8.501e-6563.281,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_HUMAN3.230e-6462.711,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_XENLA2.315e-6263.281,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DANRE4.086e-5959.431,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD4_ORYSJ2.028e-5857.061,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DROME1.839e-5150.551,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_YEAST1.729e-3343.931,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00316 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00316 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623225 ID=BQ623225; Name=BQ623225; organism=Citrus sinensis; type=EST; length=638bp
CAAGCGTTTGTTCAAAGAATTTCAGAAACCATGGTTGCCCCTCAGGATCC
TAGAGAGGAAGTTATTCAGGCATGGTACATGGATGATAGTGATGAAGATC
AAAGACTCCCCCATCACAAGGATCCAAAGGAATTTGTGTCCCTGGACCAG
CTTTCTGAACTTGGAGTACTCAGCTGGCGATTAGATGCTGATAACTATGA
AACTGATGAGGAACTGAAGAAGATTCGTGAAGATCGCGGATATTCTTACA
TGGACTTTTGTGAGGTTTGCCCAGAAAAACTGCCAAATTATGAAGAGAAG
ATCAAAAACTTTTTCGAAGAACATCTTCATACAGATGAAGAGATCCGCTA
CTGTGTGGCAGGAAGTGGTTACTTTGATGTCAGGGACCATAATGAAAAAT
GGATTCGCATATGGGTAAAGAAAGGAGGAATGATTGTTTTACCTGCTGGA
TGTTACCATCGCTTTACTTTGGATACAGACAACTATATCAAGGCTATGCG
TCTGTTTGTAGGTGATCCCGTTTGGACTCCATTCAACCGTCCCCATGATC
ATTTACCCGCAAGGAAGGGATATGTTCAAAATTTCTTGCAGAAGGAAGCT
GGTGACAGCCCTATCAATGCTGCTGCGTAATTTGTGCA
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