BQ623230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_SCHPO (COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe GN=csn5 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.871e-19 Identity = 62/169 (36.69%), Postives = 90/169 (53.25%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV--FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVV-IDAFRLINPQTMMLGQEPRQTTSNLGH-----LNKPSIQALIHGLNRH-YYSIAINY 480 G+P+EVMG + G+ V+ ++ ++D FA+P GT V A + + + K R E V+GWYHSHP +GCWLSGVD+ TQ+ + VAVV+DP +S++ V I AFR T +G + T + H N PS + G + YYS+ I Y Sbjct: 52 GMPLEVMGYVQGK-VEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFR-----TYPVGNDGSIRTKSRHHPSVLFKNLPSSKIEDAGAHAEAYYSLPITY 214
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_CANAL (COP9 signalosome complex subunit 5 OS=Candida albicans GN=RRI1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18 Identity = 45/124 (36.29%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR------PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLIN 351 G +E+MG+++G+ + +++ V+D + +P GT V A + + T M++ L + + E +VGWYH HP +GCWL G+D++TQ + L +A+VVDP++++K GKV I AFR ++ Sbjct: 92 GGSIEIMGMLVGK-ISGHSIIVMDTYRLPVEGTETRVNAQNEAY-TYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQGKVEIGAFRNVS 213
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_ASHGO (COP9 signalosome complex subunit 5 OS=Ashbya gossypii GN=RRI1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.732e-17 Identity = 53/139 (38.13%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPE--MVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS-VKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGH 408 G MEV+G++LG DE V VVD + +P GT V A ++ + + +T PE +VGWYHSHPG+GCWLSG+D TQ + +A+VVDP +S G + I AFR + S GH Sbjct: 90 GGDMEVLGMLLGYVQDEMIV-VVDSYRLPVEGTETRVNAQMESYEYTVQYL--ETAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPKRSKASGVIDIGAFRTMPETADTRSVSSHSNASRYGH 225
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_KLULA (COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis GN=RRI1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVV-IDAFRLI 348 G +EVMG+++G ++ V V D +++P GT V A ++ + + + + +VGWYHSHPG+GCWLS +DI TQ + +A+VVDP +S+ G + I AFR + Sbjct: 83 GGDIEVMGMLVGYTSNDMIV-VKDCYSLPVQGTETRVNAHMESYEYMVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSLSGNTLDIGAFRTL 198
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_YEAST (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae GN=RRI1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEA-----------VDHVFQTNML-DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVV-IDAFRLINPQT 360 G +E+MG+++G F + + V+D F +P GT V A +D ++ N D G VVGW+HSHPG+ CWLS +DI TQ + VA+VVDP++S++ K++ + AFR I ++ Sbjct: 88 GGNIEIMGILMG-FTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRTIESKS 219
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS7 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain YJM789) GN=RRI1 PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEA-----------VDHVFQTNML-DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVV-IDAFRLINPQT 360 G +E+MG+++G F + + V+D F +P GT V A +D ++ N D G VVGW+HSHPG+ CWLS +DI TQ + VA+VVDP++S++ K++ + AFR I ++ Sbjct: 88 GGNIEIMGILMG-FTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRTIESKS 219
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS1 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RRI1 PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEA-----------VDHVFQTNML-DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVV-IDAFRLINPQT 360 G +E+MG+++G F + + V+D F +P GT V A +D ++ N D G VVGW+HSHPG+ CWLS +DI TQ + VA+VVDP++S++ K++ + AFR I ++ Sbjct: 88 GGNIEIMGILMG-FTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRTIESKS 219
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Match: CSN5_CANGA (COP9 signalosome complex subunit 5 OS=Candida glabrata GN=RRI1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.058e-12 Identity = 50/147 (34.01%), Postives = 72/147 (48.98%), Query Frame = 1 Query: 1 GVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSV----EAVDHVFQTNMLDMLKQTGRPEM---VVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKG-KVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNK 417 G +EVMG++LG + T + D F +P GT V E+ +++ Q + + R E ++GWYHSHPG+ CWLS +D+ TQ + +A+VVDP +S KV I +FR Q TT LNK Sbjct: 91 GGNIEVMGMLLGNVIGN-TFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQKVRIGSFRTYQDQNDDTNFYELNTTVFDSELNK 236 The following BLAST results are available for this feature:
BLAST of BQ623230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623230 ID=BQ623230; Name=BQ623230; organism=Citrus sinensis; type=EST; length=488bpback to top |