BQ623231

Overview
NameBQ623231
Unique NameBQ623231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39
Identity = 80/172 (46.51%), Postives = 108/172 (62.79%), Query Frame = 3
Query:   57 CKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CK      ++DFF +GL    +T NR GF+VT AN E  PGLNTLG+S  R+D AP G NP H+HPRATE++ V+ G +  GFV++        +KVL +G+ FV P GMIHFQ+N+G   A    +  SQ PGV+    T+FG+DP I    L K+FQ+D  ++K L+ KF
Sbjct:   57 CKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39
Identity = 88/193 (45.60%), Postives = 117/193 (60.62%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFING 581
            CVA  D K  V VNG  CK    A  E  F S +   G+  AN  G +VT  +V + PG+NTLG+S  R+D+AP G NPPH HPRATE+ +VL G L VG + +    N   +KV+  G+ FV P G++HFQFN+GKT A    S  SQ PG++ +  T+FG++PPI    L KA ++D  VV+ L+ KF  G
Sbjct:   38 CVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 228          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.598e-39
Identity = 87/193 (45.08%), Postives = 116/193 (60.10%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFING 581
            CVA  D    V VNG  CK    A  E  F S +   G+  AN  G +VT  +V + PG+NTLG+S  R+D+AP G NPPH HPRATE+ +VL G L VG + +    N   +KV+  G+ FV P G++HFQFN+GKT A    S  SQ PG++ +  T+FG++PPI    L KA ++D  VV+ L+ KF  G
Sbjct:   36 CVA--DLNSEVTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.527e-38
Identity = 88/193 (45.60%), Postives = 116/193 (60.10%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFING 581
            CVA  D +  V +NG  CK    A  E  F S L   G+  AN  G +VT  +V   PG+NTLG+S  RID+AP G NPPH HPRATE+ +VL G L VG + S    N   ++V+  G+ FV P G++HFQFN+GKT A    S  SQ PG++ +  T+FG++PPI    L KA ++D  VV+ L+ KF  G
Sbjct:   36 CVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.065e-37
Identity = 91/197 (46.19%), Postives = 117/197 (59.39%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKP------GNTANR-LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFI 575
            CVA  DP   V VNG  CKDP    A+DFF SG+ +P      G TA+R  GF+  + +   IPGLNTLG SA R+D AP G  PPH HPRA+E  VVL G +Y GFVTS   ++ ++AKVL +GDVF  P G++HF  N G   A  +ASL SQ PG++ +AD +  A  P+  D + K    D   V  ++  FI
Sbjct:   38 CVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRRYGFTARSVD---IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTSYP-DSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAAPLPV--DLVAKTLLTDEATVDKIRANFI 226          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.780e-35
Identity = 74/172 (43.02%), Postives = 104/172 (60.47%), Query Frame = 3
Query:   57 CKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CK      ++DFF +GL   G+T N  G S+   NVE  P LNTLG++  R+D AP G NP H+HPRA E++ V+ G + VGFV++        +KV+ +G+ F  P G++HFQ+N G  +A A     SQ PGV+  A  +FGADP I    L K+FQ+D  ++K L+ KF
Sbjct:   63 CKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.685e-32
Identity = 76/190 (40.00%), Postives = 109/190 (57.37%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            ICVA  D +    V+G  CK      ++DFF   + +  +T+N  G + T A V   PGLNTLG+S  R D AP G NPPH+HPRA+E+++VL G + VGF T+    N L +KV+ + ++FV P G+ HFQ N+G  NA   A   SQ PG++T    +F   P +  + L K F +  + V  ++ KF
Sbjct:   37 ICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.580e-32
Identity = 76/172 (44.19%), Postives = 98/172 (56.98%), Query Frame = 3
Query:   57 CKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CK+      EDF  SGL   GN     GF+      E  PGLNTLGIS VR D  P   NPPH HPRATE+  +++G +Y GFV S   NN + AKV+ +G++ V+P G++HFQ N+G   A     L SQ PG+  I   VFG+   IN + L KAF L    +  L+K+F
Sbjct:   54 CKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGSG--INEELLMKAFGLSLKQIGTLKKRF 219          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.273e-31
Identity = 76/173 (43.93%), Postives = 100/173 (57.80%), Query Frame = 3
Query:   57 CKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDY-APYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            C+ P    A DF  SG+   GN +   GF+  +    Q PGL+TLG+S  R D  A  G NPPH HPRATE  +VL G +Y GFV S      L AKVL +G+V VFP  M+HFQ N+G T A  + +  S+ PG++ I  TVFG+   I    L +AF L P  ++ L+K+F
Sbjct:   52 CRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDSG---GRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGSG--IREAVLERAFGLTPAELRRLEKRF 219          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.613e-31
Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 3
Query:   81 AEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +EDFF SGL+ P NT+N  G +   AN+   PGLNTLGIS   +  AP G N PH+HP  TE  VV+EG++ VGF+T+N    TL +KV+  GD+FV P G+IH++ N+GKT       +    P  + +  T+    P I  + L  AF+ D   +  L+ KF
Sbjct:   65 SEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTTNY---TLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          
The following BLAST results are available for this feature:
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL38_ORYSJ2.962e-3946.51Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL36_ORYSJ2.962e-3945.60Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ6.598e-3945.08Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ9.527e-3845.60Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL51_ORYSJ8.065e-3746.19Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ5.780e-3543.02Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL12_ORYSJ2.685e-3240.00Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL32_ARATH4.580e-3244.19Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL24_ORYSJ2.273e-3143.93Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GLT3_ARATH6.613e-3142.07Germin-like protein subfamily T member 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00322 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623231 ID=BQ623231; Name=BQ623231; organism=Citrus sinensis; type=EST; length=667bp
ATATCTGTGTCGCCATCAATGATCCCAAGGATGGTGTGTTTGTGAATGGG
AAGTTCTGCAAGGACCCCAAGCTTGCGAAAGCAGAAGATTTCTTTTTATC
AGGGCTAGACAAGCCTGGAAACACAGCAAATCGACTTGGCTTTAGTGTGA
CAAATGCAAATGTTGAGCAAATTCCAGGACTTAACACTCTTGGCATATCA
GCAGTCCGTATTGACTACGCGCCATACGGTCAAAATCCACCTCACACTCA
CCCCCGTGCCACTGAAATCCTGGTGGTCCTGGAAGGAACTCTTTATGTTG
GTTTTGTGACATCGAACCAACTAAATAACACACTCATCGCAAAAGTTCTG
AACAAGGGAGACGTTTTTGTGTTTCCAATTGGTATGATTCACTTCCAATT
CAACATTGGAAAAACAAATGCAGTTGCGTTTGCCAGTTTGGGCAGCCAGT
TCCCTGGTGTCATTACCATAGCCGACACGGTCTTCGGAGCCGATCCTCCA
ATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAACGTTGT
GAAAGATCTTCAGAAGAAGTTCATTAATGGCAATTAGGAGAACAGAATGA
GCTTTCCGGTGGCTTTACTATTTTTCCTCCATTATATCATATCGGGTTGT
AATAAAAGAGGTCTCTT
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