BQ623243

Overview
NameBQ623243
Unique NameBQ623243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2038 contig Csv1_Contig2038:368..520. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_RHIMI (Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizomucor miehei GN=GPD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.383e-12
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F+GDS SSIFDAKAGI+L+  FVKL+SWYDNE+GYSTRV D
Sbjct:  284 FIGDSHSSIFDAKAGISLNPNFVKLISWYDNEYGYSTRVVD 324          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_EMENI (Glyceraldehyde-3-phosphate dehydrogenase OS=Emericella nidulans GN=gpdA PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.383e-12
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            GD+RSSIFDAKAGIAL+  F+KLVSWYDNEWGYS RV D
Sbjct:  287 GDTRSSIFDAKAGIALNSNFIKLVSWYDNEWGYSRRVVD 325          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P3_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Saccharomyces cerevisiae GN=TDH3 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.383e-12
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F+GDS SSIFDA AGI LS KFVKLVSWYDNE+GYSTRV D
Sbjct:  284 FLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYSTRVVD 324          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F+GDS SSIFDA AGI LS KFVKLVSWYDNE+GYSTRV D
Sbjct:  284 FLGDSNSSIFDAAAGIQLSPKFVKLVSWYDNEYGYSTRVVD 324          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F+GD+RSSIFDAKAGI LSK FVK+VSWYDNE+GYS RV D
Sbjct:  282 FIGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVID 322          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            +GD+ SSIFDAKAGIAL++ F+KLVSWYDNEWGYS RV D
Sbjct:  288 IGDAHSSIFDAKAGIALNEHFIKLVSWYDNEWGYSRRVVD 327          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            GD+ SSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV D
Sbjct:  288 GDNHSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLD 326          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F+GD+ SSIFDA AGI LS KFVKLVSWYDNE+GYSTRV D
Sbjct:  283 FLGDNNSSIFDASAGIMLSPKFVKLVSWYDNEYGYSTRVVD 323          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            FVGDS SSIFDAKAGIAL+  FVKL+SWYDNE+GYS RV D
Sbjct:  359 FVGDSHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVD 399          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            FVGD+ SSIFDAKAGI LS  FVKL+SWYDNE+GYSTRV D
Sbjct:  287 FVGDAHSSIFDAKAGIQLSPTFVKLISWYDNEFGYSTRVVD 327          
The following BLAST results are available for this feature:
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G3P_RHIMI1.383e-1278.05Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizom... [more]
G3P_EMENI1.383e-1282.05Glyceraldehyde-3-phosphate dehydrogenase OS=Emeric... [more]
G3P3_YEAST1.383e-1282.93Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Sacc... [more]
G3P2_YEAST1.806e-1282.93Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Sacc... [more]
G3P_HOMAM2.359e-1280.49Glyceraldehyde-3-phosphate dehydrogenase OS=Homaru... [more]
G3P_ASPOR2.359e-1277.50Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_SCLSC3.081e-1282.05Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_ASHGO3.081e-1280.49Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3PT_MACFA3.081e-1280.49Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P3_RHIRA3.081e-1280.49Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00334 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00334 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623243 ID=BQ623243; Name=BQ623243; organism=Citrus sinensis; type=EST; length=154bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGGGGATTTTGATTGGCCACATGGCGAAGACCC
AGTA
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