BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25 Identity = 58/168 (34.52%), Postives = 100/168 (59.52%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +++FD + K+ ++ W MI Y++NG A +A+ +F +M +D V+P+ + R ++ YV R+ Y + F+++ LIDM+++ G ++ AR+VFD R+VV W++++ GYG+HG +A + M + G+ P+ VTFLGLL AC+HSGM Sbjct: 277 KILFDKM--KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV-FISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439 HSP 2 Score: 89.7373 bits (221), Expect = 9.521e-18 Identity = 48/167 (28.74%), Postives = 87/167 (52.10%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 R +F+ + R + +WT ++ +Y+QNG +AL +F QM + D VKP+ GR IHA V++ E + P + L MY++ G + TA+++FD +K N++ W ++++GY +G +A F +M + + PD ++ + AC+ G Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD--VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE-IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337 HSP 3 Score: 77.0258 bits (188), Expect = 6.386e-14 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 86 WTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDN--LKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYA 523 W +I YS+N DAL ++ M Q V P++FT GR +HA V R ++ + FV N LI +Y++ + +AR VF+ L +R +VSWT++++ Y +G +A F QMRK + PD V + +L A Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNM--QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV-FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 56/159 (35.22%), Postives = 94/159 (59.12%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRN-VVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +RD +W+ MI + NG N++ F ++ Q + PN + FG+ +H +V + Y ++ V N LIDMYSR G++ AR+VF+ ++++ +VSWTS++ G MHG G++A F++M G+ PDG++F+ LL+ACSH+G+ Sbjct: 231 HRDDVSWSTMIVGIAHNGSFNESFLYFREL--QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS-VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.991e-24 Identity = 64/168 (38.10%), Postives = 92/168 (54.76%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD + K + TW +I YSQNG A D L L+ QM + V P+ FT G ++ V N + + FV+N I MY+R G++ AR VFD + +++VSWT+++ YGMHG+G+ FD M K G+ PDG F+ +L ACSHSG+ Sbjct: 211 RRLFDEMPVKG--LITWNAVISGYSQNGLAYDVLELYEQM--KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV-FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373 HSP 2 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 38/167 (22.75%), Postives = 78/167 (46.71%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 R +F+ ++ + +I Y+ N DA +F +M ++ V ++ T GR +H ++ + + V N I MY + G ++ R +FD + + +++W ++++GY +GL ++QM+ G+ PD T + +L +C+H G Sbjct: 108 RKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM--KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA-VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.212e-24 Identity = 59/158 (37.34%), Postives = 93/158 (58.86%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEM-LIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +R+V WT +I +++ A +A LF QM ++ L PN T G+ +H Y++RN EM + F + IDMY+R G+I AR VFD + +RNV+SW+S++ +G++GL ++A F +M+ + + P+ VTF+ LL ACSHSG Sbjct: 274 DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL--PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTS--FIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.212e-24 Identity = 59/169 (34.91%), Postives = 97/169 (57.40%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK-EGLAPDGVTFLGLLYACSHSGM 541 R +FD++ RD+ +W VMI Y+Q+G NDAL LF ++ + K KP+ T GR IH +V ++ + + V LIDMYS+ G ++ A +VF++ ++++V+W +++ GY MHG A F++M+ GL P +TF+G L AC+H+G+ Sbjct: 212 RALFDSMC--ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK-PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK-VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.807e-24 Identity = 61/168 (36.31%), Postives = 92/168 (54.76%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD K+ + +W MI Y+QNG DA++LF +M Q PN T G+ +H V +E I +V+ LI MY++ G I AR +FD + ++N V+W ++++GYG+HG G +A F +M G+ P VTFL +LYACSH+G+ Sbjct: 374 RKLFDESPEKS--LPSWNAMISGYTQNGLTEDAISLFREM--QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI-YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536 HSP 2 Score: 67.781 bits (164), Expect = 3.874e-11 Identity = 39/155 (25.16%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 D+ + MI Y+ NG +L+LF ++ ++ + IH Y L++ + + V+ L +YS+ +I++AR +FD ++++ SW ++++GY +GL + A F +M+K +P+ VT +L AC+ G Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA-----IHGYCLKSNF-LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP185_ARATH (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.807e-24 Identity = 63/168 (37.50%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDN--LKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +FD + KN V +WT MI Y +N +AL +F +M + D VKPN T G+QIH + ++ ++ V + L++MYS+SG++ AR +FDN + QR+++SW S++ Y HG G +A ++QMRK G P VT+L LL+ACSH+G+ Sbjct: 286 LFDRMPEKN--VISWTTMITGYVENKENEEALNVFSKMLR-DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKN-EIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGL 449
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP257_ARATH (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.161e-23 Identity = 58/157 (36.94%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLGLLYACSHSG 538 R+V +WT MI +Y +N ++A LF +M D VKPN FT GR +H Y +N + +L F+ LIDMYS+ G + AR VFD ++ +++ +W S++T G+HG G++A F++M +E + PD +TF+G+L AC+++G Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD--VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGF-VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.981e-23 Identity = 58/167 (34.73%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK-EGLAPDGVTFLGLLYACSHSGM 541 +FD + K D+ W +I +++NG +ALAL+ +M K +KP+ FT G+++H Y+++ + +N L+D+Y+R G ++ A+ +FD + +N VSWTSL+ G ++G G +A F M EGL P +TF+G+LYACSH GM Sbjct: 178 VFDKMPEK--DLVAWNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL-HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339 HSP 2 Score: 88.9669 bits (219), Expect = 1.624e-17 Identity = 50/168 (29.76%), Postives = 89/168 (52.98%), Query Frame = 2 Query: 35 HRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 H+V P N V W +I Y++ G + A +L+ +M + LV+P+ T G IH+ V+R+ + LI +V N L+ +Y+ GD+ +A VFD + ++++V+W S++ G+ +G ++A + +M +G+ PDG T + LL AC+ G Sbjct: 73 HKVFSKIEKPIN--VFIWNTLIRGYAEIGNSISAFSLYREM-RVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLI-YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.587e-23 Identity = 61/164 (37.20%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 R + D + KN V +WT MI YSQ G +++AL +F +M + D KPN FT G+QIH +++ Y+ I FV + L+DMY+++G I AR +F+ L +R+VVS T+++ GY GL ++A F ++ EG++P+ VT+ LL A S Sbjct: 107 RKVLDEMPEKN--VVSWTAMISRYSQTGHSSEALTVFAEMMRSDG--KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI-FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265 HSP 2 Score: 99.7525 bits (247), Expect = 9.200e-21 Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVA---NCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLGLLYACSHSGM 541 RDV + T +I Y+Q G +AL +F ++ + + PN T G+Q H +VLR + +PF A N LIDMYS+ G++ AR +FDN+ +R +SW +++ GY HGLG + F MR E + PD VT L +L CSH M Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG--MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE----LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |