BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19 Identity = 47/160 (29.38%), Postives = 87/160 (54.37%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK---EGLAPDGVTFLGLLYACSHSGM 541 RDV +W ++ + +QNG +A++LF +M + ++PN T + IHA+ R + FV+N L+D+Y + G+++ A VF ++++ +W S++ + +HG ++A F++M K + PD +TF+GLL AC+H G+ Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS-IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDV-FVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGL 379
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR55_ARATH (Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana GN=PCMP-E24 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 77 VATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 ++TW +I ++ N + + L +M PN T G++ H Y+LR Q + N L+DMY++SG+I A+ VFD++++R+ V++TSL+ GYG G G+ A F M + G+ PD VT + +L ACSHS + Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSG--FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540 HSP 2 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 40/151 (26.49%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 86 WTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 W V+IGSY +N ++++++ +M K ++ + FT +GR +H + + + + +V N LI MY R G +D AR +FD + +R+ VSW +++ Y +A D+M G+ VT+ + C +G Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMS--KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL-YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19 Identity = 55/165 (33.33%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 47 FDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 F++++ KN + ++ + +N A L ++ +++ V +AFT G QIH+ V++ P V N LI MYS+ G IDTA VF+ ++ RNV+SWTS++TG+ HG + F+QM +EG+ P+ VT++ +L ACSH G+ Sbjct: 431 FESLSEKN--LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV--SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP-VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590 HSP 2 Score: 70.4774 bits (171), Expect = 5.977e-12 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQM----FQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSR---SGDIDTARVVFDNLKQRNVVSWTSLMTGYGMH-GLGDKAHWAFDQMRKEG-LAPDGVTFLGLLYACSH 532 +FD ++ N V TWT+MI Q G +A+ F M F+ DK + F+ G+Q+H++ +R+ L+ V L+DMY++ G +D R VFD ++ +V+SWT+L+TGY + L +A F +M +G + P+ TF AC + Sbjct: 225 VFDKMSELN--VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS------LGKQLHSWAIRSG---LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP345_ARATH (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.611e-19 Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXF--GRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R++ +W MI ++QNG +++AL +F + PN +T G++ HA++L+ P V++ L+DMY++ G+ID + VF+ + Q+N WTS+++ Y HG + F +M KE +APD VTFL +L AC+ GM Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMFLSAAAE---TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSC-PVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGM 590 HSP 2 Score: 68.9366 bits (167), Expect = 1.739e-11 Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGAN-DALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYA 523 R +FD ++ K D+ +W ++ SQ G +A+ +F M ++ + +FT RQIH ++ YE L+ V N L+ YS+ G ++ + VF + +RNVVSWT++++ D A F MR +G+ P+ VTF+GL+ A Sbjct: 229 RRVFDEMSFK--DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK--LARQIHGLCIKRGYESLLE-VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP232_ARATH (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.611e-19 Identity = 58/174 (33.33%), Postives = 93/174 (53.45%), Query Frame = 2 Query: 26 LMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGL--APDGVTFLGLLYACSHSGM 541 LM ++V FD++ +N V +W+ ++ + NG +L+LF +M +Q + PN FT G QIH + L+ +EM++ V N L+DMYS+ G I+ A VF + R+++SW +++ G+ G G KA F M++ + PD T LL ACS +GM Sbjct: 58 LMAYKV-FDSMPERN--VVSWSALMSGHVLNGDLKGSLSLFSEMGRQG--IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE-VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225 HSP 2 Score: 91.2781 bits (225), Expect = 3.272e-18 Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R FD I K + + +W+ +I Y+Q G +A+ LF ++ + + + ++F G+Q+ A ++ L V N ++DMY + G +D A F ++ ++V+SWT ++TGYG HGLG K+ F +M + + PD V +L +L ACSHSGM Sbjct: 267 RKAFDQI--KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI--DSFALSSIIGVFADFALLRQGKQMQALAVKLP-SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.611e-19 Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFD-QMRKEGLAPDGVTFLGLLYACSHSGM 541 R+V +WT MI ++Q + L L+ +M + PN +T GR +H L + + ++N LI MY + GD+ A +FD ++VVSW S++ GY HGL +A F+ M K G PD +T+LG+L +C H+G+ Sbjct: 184 RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS--DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYL-HISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18 Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +D TWT MI ++ NG +AL F +M Q++ V PN++T G QIH V++ + V N L+ MY + G+ + A +F + + N+VS+ ++++GY +G G KA F + G P+GVTFL LL AC H G Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKE--VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLS-VQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553 HSP 2 Score: 69.707 bits (169), Expect = 1.020e-11 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQM 469 R +FD + +N V TWT MI Y + G D LF +M Q+ VK N+ T G QIH V R E + F+ N L+ MYS+ G + A+ VF +K ++ VSW SL+TG +A+ F++M Sbjct: 228 RSLFDRMTERN--VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD-VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL-FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP305_ARATH (Pentatricopeptide repeat-containing protein At4g08210 OS=Arabidopsis thaliana GN=PCMP-E100 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18 Identity = 52/158 (32.91%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 N+D+ ++ +I ++G + A LF ++ + + + F +G+QIH ++ YE P A L+DMY + G+ID V+FD + +R+VVSWT ++ G+G +G ++A F +M G+ P+ VTFLGLL AC HSG+ Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG--LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE-PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGL 559
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP159_ARATH (Pentatricopeptide repeat-containing protein At2g17210 OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYAC 526 R +FD ++ RDV +W+V+I SY Q+ L LF +M + K +P+ T GR +H + +R +++ FV N LIDMYS+ D+D+A VFD RN+VSW S++ G+ + D+A F M +E + D VT + LL C Sbjct: 200 RKLFDEMS--ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK-TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 359 HSP 2 Score: 91.6633 bits (226), Expect = 2.506e-18 Identity = 46/157 (29.30%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +DV + + MI + G +++A+++F M PNA T + H +R + V ++D Y++ G I+ AR FD + ++N++SWT +++ Y ++GL DKA FD+M+++G P+ VT+L L AC+H G+ Sbjct: 413 KDVVSCSTMISGLAHAGRSDEAISIFCHMRDT-----PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGL 564
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR65_ARATH (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.469e-18 Identity = 56/167 (33.53%), Postives = 86/167 (51.50%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 RV+F+ K DV WT M+ Y Q ++AL LF M Q ++P+ F G+ IH Y+ N+ + V L+DMY++ G I+TA VF +K+R+ SWTSL+ G M+G+ +A + +M G+ D +TF+ +L AC+H G Sbjct: 233 RVLFERSPVK--DVVLWTAMMNGYVQFNRFDEALELFRCM--QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV-DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGG 394 HSP 2 Score: 78.9518 bits (193), Expect = 1.681e-14 Identity = 56/204 (27.45%), Postives = 94/204 (46.08%), Query Frame = 2 Query: 20 RVLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQ-------------------------------MRKEGLAPDGVTFLGLLYACSHSG 538 ++ + H+V FD + RDV +W +I SY NG DA+ +F +M Q+ L K + T G +I+ +V+ ++EM + + N L+DM+ + G +D AR VFD+++ +NV WTS++ GY G D+A F++ M+ G+ PD + LL C+ +G Sbjct: 96 KIEITHKV-FDEMP--QRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL-KFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVR-IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTG 293 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |