BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP195_ARATH (Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana GN=PCMP-E33 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.243e-17 Identity = 50/177 (28.25%), Postives = 92/177 (51.98%), Query Frame = 2 Query: 11 LSARVLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 L+A ++++ + F+ + +W +M+ Y +G A +A+A F QM + + +PNA T G +H+ +++ + P V N L+DMY++ G I+++ F + + +VSW ++++ Y HGL A F M++ L PD V+FL +L AC H+G+ Sbjct: 553 LAAAIVLFDKCGFE------KSTVSWNIMMNGYLLHGQAEEAVATFRQM--KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTP-VGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGL 720 HSP 2 Score: 83.9593 bits (206), Expect = 5.224e-16 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 ++RDV +W+ MI SY Q G ++A++LF M + +KPNA T G+ IH Y ++ E + A +I MY++ G A F+ L ++ V++ +L GY G +KA + M+ G+ PD T +G+L C+ Sbjct: 362 EDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH--IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE-TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513 HSP 3 Score: 68.9366 bits (167), Expect = 1.739e-11 Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 +D ++W M+ +Y+ NG + L LF M D V+ N G IH Y ++ + VA L+ MYS+ G+++ A +F N++ R+VVSW++++ Y G D+A F M + + P+ VT +L C+ Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD--VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS-VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP415_ARATH (Pentatricopeptide repeat-containing protein At5g43790 OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17 Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQN---GGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +F+ I + D+ATW ++ +Y+ + + L LF +M V+PN + G H YVL+N L FV LID+YS+ G + AR VFD + QR+V + +++ G +HG G + + + +GL PD TF+ + ACSHSG+ Sbjct: 170 RSLFERI--REPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM-----QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT-LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGL 332
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17 Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVA----NCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 R +FD K DV TW MI Y G +AL +F +M +D P+ T G+++H Y+L +V N LIDMY++ G ID A VF +K R++ +W +L+ G +H + + F++M++ + P+ VTF+G++ ACSHSG Sbjct: 229 RELFDRFTEK--DVVTWNAMISGYVNCGYPKEALGIFKEM--RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSG 394
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17 Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R MFD + +R++ TW++MI Y++N A+ LF F + + V N FG + + YV+++ + + + L+DM+ R GDI+ A VF+ L + + +SW+S++ G +HG KA F QM G P VTF +L ACSH G+ Sbjct: 203 REMFDEMP--HRNLFTWSIMINGYAKNNCFEKAIDLFE--FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNL-ILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17 Identity = 52/168 (30.95%), Postives = 88/168 (52.38%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 + +FD + +RDV + M+ Y QN +AL +F M ++ L+ P+ T +H Y++ Q+ L + LIDMYS+ G I A +VF+ ++ +++ W +++ G +HGLG+ A Q+ + L PD +TF+G+L ACSHSG+ Sbjct: 303 KTLFDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLL-PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF-YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGL 466
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP377_ARATH (Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.939e-17 Identity = 50/166 (30.12%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +F ++ KN +W +I Y G A ++F + + V T G Q+H ++ + V+N LIDMY++ GDI A+ VF+ ++ +V SW +L++GY HGLG +A D M+ P+G+TFLG+L CS++G+ Sbjct: 405 LFAELSSKNE--VSWNTVIVGYENLGEGGKAFSMFREALRNQ--VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA-VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGL 565 HSP 2 Score: 21.557 bits (44), Expect = 1.939e-17 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 1 DMYAKCKSVDVA 36 D+YAKC+ +D A Sbjct: 391 DVYAKCEKMDTA 402 HSP 3 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 62 PKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 PKN DV W+ MI + QNG N+A+ LF +M ++ V PN FT G Q+H V++ +++ I +V+N LID+Y++ +DTA +F L +N VSW +++ GY G G KA F + + ++ VTF L AC+ Sbjct: 309 PKN-DVVPWSFMIARFCQNGFCNEAVDLFIRM--REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI-YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR69_ARATH (Pentatricopeptide repeat-containing protein At1g32415, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQ--YEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 ++D TWTVMI QN +A +L M + +KP T G+ IH + + Y+ + + N L+ MY++ G I+ A +F + Q++ VSW S++ G HGL DKA F +M G P+ VTFLG+L ACSHSG+ Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG--LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDL-ILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP403_ARATH (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHS 535 DV W+ +I Y+QNG N+A +F +M ++ VKP+ F ++ +Y+ + + +V LIDM ++ G +D A +F+ + QR++VS+ S+M G +HG G +A F++M EG+ PD V F +L C S Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKN--VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP369_ARATH (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVF--DNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R++FD ++ RDV TW+ MI Y + G N AL +F QM + K N T G+ +H Y+L + + + LIDMY++ G I A VF ++K+ + + W +++ G HG ++ F +MR+ + PD +TFL LL ACSH G+ Sbjct: 194 RLVFDEMS--ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS-KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTV-ILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGL 359 HSP 2 Score: 68.1662 bits (165), Expect = 2.967e-11 Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 308 NCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLA-PDGVTFLGLLYACSHSG 538 N ++D Y++SGD+ +AR+VFD + +R+VV+W+S++ GY G +KA FDQM + G + + VT + ++ AC+H G Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 53/156 (33.97%), Postives = 76/156 (48.72%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 RD+ +W+ +IG Y Q G + F M Q KP F GRQ+HA L E V + LI+MYS+ G I A ++F + ++VS T+++ GY HG +A F++ K G PD VTF+ +L AC+HSG Sbjct: 374 RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG--TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNST-VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526 HSP 2 Score: 73.559 bits (179), Expect = 7.061e-13 Identity = 44/153 (28.76%), Postives = 73/153 (47.71%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 R+ TWT +I G + L F +M + ++L + +T +G+ IH +V+ + + VAN L MY+ G++ +F+N+ +R+VVSWTSL+ Y G KA F +MR + P+ TF + AC+ Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL--SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTL-CVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321 HSP 3 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 47/164 (28.66%), Postives = 75/164 (45.73%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 R +FD + + D+ +WT +I Y +++AL LF M D V P+ +G +HAY ++ + +V + L+DMY R G ID + VF + RN V+WT+++TG G + F +M + D TF L AC+ Sbjct: 60 RQVFDKMP--HGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSV-YVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220 HSP 4 Score: 69.707 bits (169), Expect = 1.020e-11 Identity = 43/149 (28.86%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLL 517 RDV +WT +I +Y + G A+ F +M ++ V PN T +G Q+H VL + V+N ++ MYS G++ +A V+F ++ R+++SW++++ GY G G++ F MR+ G P LL Sbjct: 273 RDVVSWTSLIVAYKRIGQEVKAVETFIKM--RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS-VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |