BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP337_ARATH (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.063e-16 Identity = 51/158 (32.28%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLL 517 +FD ++ ++ W +I Y++ G DA+AL+ QM + VKP+ FT G IH +++ + + +V N L+ MY++ GDI AR VFD + ++ VSW S++TGY HGL +A F M + G+ PD V +L Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG--VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV-YVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303 HSP 2 Score: 82.8037 bits (203), Expect = 1.164e-15 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD I K D +W M+ Y +G ++AL +F M Q ++P+ GRQ+H +V+R E + VAN LI +YS+ G + A +FD + +R+ VSW ++++ + + G K F+QM + PDG+TF+ +L C+++GM Sbjct: 250 RNVFDMIPHK--DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNG--IEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELS-VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLK---YFEQMHRANAKPDGITFVSVLSLCANTGM 406
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP255_ARATH (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.063e-16 Identity = 50/160 (31.25%), Postives = 84/160 (52.50%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRN-VVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 K++D+ +W +I ++Q G + DA+ F + + V AF+ G+QIHA ++ + + FV + LI MYS+ G I++AR F + ++ V+W +++ GY HGLG + F QM + + D VTF +L ACSH+G+ Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ--LGQQIHALATKSGF-VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGL 525 HSP 2 Score: 74.3294 bits (181), Expect = 4.140e-13 Identity = 46/164 (28.05%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSR--SGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 +FD + ++D+ +W MI +S++ A LF QM Q V+ + +T FG+ +H V++ E + N LI MY + +G ++ A +F++LK ++++SW S++TG+ GL + A F +R + D F LL +CS Sbjct: 260 VFDGLGG-SKDLISWNSMIAGFSKHELKESAFELFIQM--QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ-VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR7_ARATH (Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis thaliana GN=PCMP-E3 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.000e-16 Identity = 56/199 (28.14%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQM----------------------------FQQDKL---VKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD I +N V W MI Y+ G +A+ L+ M F + + KPN T ++IH+Y RN E P + + L++ Y R G I ++VFD+++ R+VV+W+SL++ Y +HG + A F +M + PD + FL +L ACSH+G+ Sbjct: 103 RKLFDEIPQRNAVV--WNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPH-PQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGL 298
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.000e-16 Identity = 49/165 (29.70%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 47 FDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 F+ + KN + +W +I Q +A+ +F M Q+ V + T + I+ Y+ +N ++ + + L+DM+SR GD ++A +F++L R+V +WT+ + M G ++A FD M ++GL PDGV F+G L ACSH G+ Sbjct: 426 FETMPEKN--IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG-VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR-LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586 HSP 2 Score: 80.4925 bits (197), Expect = 5.776e-15 Identity = 46/146 (31.51%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 95 MIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLG-DKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 +I Y+ +G N+A+ LF +M + P+ +T G QIH +++ Y + FV N L+ Y+ G++D+AR VFD + +RNVVSWTS++ GY D F +R E + P+ VT + ++ AC+ Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSG--ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL-FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247 HSP 3 Score: 73.1738 bits (178), Expect = 5.025e-14 Identity = 54/197 (27.41%), Postives = 80/197 (40.61%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQM--------------------------------RKEGLAPDGVTFLGLLYACSHSG 538 +FD N D+ M +Y + G +AL +F M D V+P+ + +G+ H YVLRN +E + N LIDMY + DTA +FD + + VV+W S++ GY +G D A F+ M +EG+ DGVT + + AC H G Sbjct: 293 LFDEYGASNLDLCN--AMASNYVRQGLTREALGVFNLMM--DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW-DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484 HSP 4 Score: 23.483 bits (49), Expect = 5.025e-14 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 1 DMYAKCKSVDVA 36 DMY KC ++DVA Sbjct: 279 DMYMKCNAIDVA 290 HSP 5 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 47/164 (28.66%), Postives = 82/164 (50.00%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 R +FD ++ +N V +WT MI Y++ A DA+ LF +M + D+ V PN+ T G +++A++ RN + + + L+DMY + ID A+ +FD N+ ++ + Y GL +A F+ M G+ PD ++ L + +CS Sbjct: 189 RKVFDEMSERN--VVSWTSMICGYARRDFAKDAVDLFFRMVR-DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP119_ARATH (Putative pentatricopeptide repeat-containing protein At1g74400 OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.224e-16 Identity = 47/175 (26.86%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPF-VANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAF------DQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD P+ +++ WT MI +Y++N + +A+ LF +M + + ++ + G +I++ ++ + + + + N L++MY +SG+ + AR +FD +++V ++TS++ GY ++G ++ F DQ + + P+ VTF+G+L ACSHSG+ Sbjct: 120 RQVFDE-TPEKQNIVLWTAMISAYTENENSVEAIELFKRM--EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGL 291
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP436_ARATH (Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.823e-16 Identity = 53/165 (32.12%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSH 532 R +FD + PK RD++ VMIG+ ++NG ++L F +M++ +K +AF FG+ IH VL+ YE F+ + LIDMYS+ G++ AR VF +L ++++V + ++++GY + D+A M+ G+ PD +T+ L+ SH Sbjct: 71 RKVFDEM-PK-RDISGCVVMIGACARNGYYQESLDFFREMYKDG--LKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYES-DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230 HSP 2 Score: 80.4925 bits (197), Expect = 5.776e-15 Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 DV +WT +I N A F QM + PN+ T G++IH Y + E FV + L+DMY + G I A ++F ++ V++ S++ Y HGL DKA FDQM G D +TF +L ACSH+G+ Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHG--LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDH-GFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGL 404
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP243_ARATH (Pentatricopeptide repeat-containing protein At3g18970 OS=Arabidopsis thaliana GN=PCMP-E93 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.911e-16 Identity = 52/178 (29.21%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 26 LMWHRVMFDAIAPKNRDVATWTVMIGSYSQ-----NGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIP-FVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 L + R +FD + R TW MIG Y N A A+ LF + V+P T G +H Y+ + + + F+ L+DMYS+ G ++ A VF+ +K +NV +WTS+ TG ++G G++ ++M + G+ P+ +TF LL A H G+ Sbjct: 163 LRYARKVFDEMP--ERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR43_ARATH (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.985e-15 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD + PK R+V +W +I Y+ NG A A+ F M KP+ T G I Y+ +NQ + L LI MY+R G++ A+ VFD +K+R+VVS+ +L T + +G G + +M+ EG+ PD VT+ +L AC+ +G+ Sbjct: 351 RQLFDTM-PK-RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS-KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIK-LNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGL 514 HSP 2 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 59/198 (29.80%), Postives = 82/198 (41.41%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDM--------------------------------YSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEG-LAPDGVTFLGLLYACSH 532 R FD + K+ V +W M+ Y+QNG DAL LF M + V+PN T R + ++ + L FV L+DM Y+R GD+ +AR +FD + +RNVVSW SL+ GY +G A F+ M G PD VT + +L AC H Sbjct: 218 RKYFDRMPEKS--VVSWNAMLSGYAQNGFTEDALRLFNDMLRLG--VRPNETTWVIVISACSFRADPSLTRSL-VKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.985e-15 Identity = 52/173 (30.06%), Postives = 92/173 (53.18%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMF---QQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNL-KQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMR-KEGLAPDGVTFLGLLYACSHSGM 541 R +FD + +N V +W+ +I Y G +AL LF +M + V+PN FT G+ +HAY+ + E+ I + LIDMY++ G ++ A+ VF+ L +++V ++++++ M+GL D+ F +M + + P+ VTF+G+L AC H G+ Sbjct: 148 RKLFDEMPERN--VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDI-VLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP355_ARATH (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana GN=PCMP-E45 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.593e-15 Identity = 46/159 (28.93%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 + +D +W MI + +A+ LF M Q +KP+ GR +H Y+L + + ++DMY++ G I+TA +F+ ++ +NV +W +L+ G +HG G ++ F++M K G P+ VTFL L AC H+G+ Sbjct: 266 EKKDKVSWNSMISGLVHCERSKEAIDLFSLM-QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW-DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |