BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP256_ARATH (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14 Identity = 46/170 (27.06%), Postives = 80/170 (47.06%), Query Frame = 2 Query: 29 MWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +W R M + RD +W ++ ++ G + AL+ F M + KP+ +T G+ IH +++R+ Y++ + + ++DMYS+ D A VF R+++ W S++ G +G + F + EG+ PD VTFLG+L AC G Sbjct: 451 IWFRQMSEL-----RDEVSWNALLTGVARVGRSEQALSFFEGMQVE---AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDV-VIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREG 611
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP448_ARATH (Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E38 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 59/208 (28.37%), Postives = 96/208 (46.15%), Query Frame = 2 Query: 2 TCTLSARVLMWHRVMFDAIAPKNRD-VATWTVMIGSYSQNGGANDALALFPQM-FQQDKLV------------------------KPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE--GLAPDGVTFLGLLYACSHSGM 541 TC S ++L + + + RD V T MI YS G N+A+ ++ + D+++ +PN G+QIH LRN + + + N L+DMY + G I AR +F + ++VVSWTS++ Y ++G G KA F +M +E G+ P+ VTFL ++ AC+H+G+ Sbjct: 194 TCA-SLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF-VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGL 399
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHG-------------LGDKAHWA------------------FDQMRKEGLAPDGVTFLGLLYACSHSG 538 R+ WT +I Y+ G ++A+A++ M +++ + P +FT GRQ HA R + + +V N +IDMY + ID AR VFD + +R+V+SWT L+ Y G D W FD+M K G+ D VT G + AC+ G Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEE--ITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV-YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP423_ARATH (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.089e-13 Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 DV +W ++ Y Q+G + + LF ++ + D V PN F+ G IH+ +++ E V NCLIDMY + G +D A +VF ++++++ VSW +++ +G + W F QM PD VT+ L+ A SG Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSD--VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSG 268 HSP 2 Score: 66.6254 bits (161), Expect = 8.631e-11 Identity = 42/156 (26.92%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEG-LAPDGVTFLGLLYACSH 532 N + ++W ++ Y + + +A F +M V+ + ++ +G IHA + + + VA+ LIDMYS+ G + A ++F + ++N++ W +++GY +G +A F+Q+++E L PD TFL LL CSH Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG--VRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRV-VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH 434
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP278_ARATH (Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana GN=At3g51320 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.089e-13 Identity = 49/173 (28.32%), Postives = 84/173 (48.55%), Query Frame = 2 Query: 23 VLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 VL H+ +FD + KN + +W +MI +Y +++LF +M + + N T GR +HA ++R + + LIDMY + ++ AR +FD+L RN V+W ++ + +HG + F+ M L PD VTF+G+L C+ +G+ Sbjct: 200 VLAAHK-LFDEMPDKN--IISWNIMISAYLGANNPGVSISLFREMVRAG--FQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSV-VIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGL 366
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13 Identity = 49/168 (29.17%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 41 VMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGL--APDGVTFLGLLYACSHSG 538 ++F + KN +W ++ +Y QN A L+ + + +V+ + F GR IHA+ ++ E I FV + L+DMY + G I+ + FD + ++N+V+ SL+ GY G D A F++M G P+ +TF+ LL ACS +G Sbjct: 265 IIFTEMGTKN--AVSWCSLVAAYVQNHEDEKASVLY--LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI-FVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427 HSP 2 Score: 70.8626 bits (172), Expect = 4.577e-12 Identity = 48/153 (31.37%), Postives = 75/153 (49.02%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 R+V +WT +I +QNG + AL F +M ++ V PN FT G+QIHA ++ +L FV DMY ++ D AR +FD + +RN+ +W + ++ G +A AF + R+ P+ +TF L ACS Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREG--VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG-RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220 HSP 3 Score: 67.3958 bits (163), Expect = 5.060e-11 Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 245 GRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTF 505 GR +HA +++ PF+AN LI+MYS+ ++AR+V RNVVSWTSL++G +G A F +MR+EG+ P+ TF Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 111
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP114_ARATH (Pentatricopeptide repeat-containing protein At1g71420 OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13 Identity = 49/156 (31.41%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 RD+ W +I +++ A+ LF Q+ +Q+KL P+ +T IHA V++ + + + N LI Y++ G +D VFD++ R+VVSW S++ Y +HG D F +M + PD TF+ LL ACSH+G Sbjct: 333 RDIVAWNGIITAFAVYDPER-AIHLFGQL-RQEKL-SPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGF-LADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAG 481 HSP 2 Score: 68.9366 bits (167), Expect = 1.739e-11 Identity = 49/166 (29.52%), Postives = 75/166 (45.18%), Query Frame = 2 Query: 26 LMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTAR---VVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGL 514 +++ R +FD + +N V +WT +I Y Q G + LF M PN FT G+Q+H L+ I +VAN +I MY R D A VF+ +K +N+V+W S++ + LG KA F +M +G+ D T L + Sbjct: 112 ILYARQVFDTMPERN--VVSWTALITGYVQAGNEQEGFCLFSSMLSH---CFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSI-YVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP411_ARATH (Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.170e-13 Identity = 47/166 (28.31%), Postives = 79/166 (47.59%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +F+ ++ KN + +W MI + QNG A LA F + +P+ T + IH ++ + + L+D+YS+ G ++ + VF + + ++WT+++ Y HG G A F+ M G++PD VTF LL ACSHSG+ Sbjct: 191 LFEDLSIKN--LVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH--EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN-KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351 HSP 2 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 42/157 (26.75%), Postives = 74/157 (47.13%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 RD+ +W +I YS G + +M + +PN T GR IH V++ + V N I+ Y ++GD+ ++ +F++L +N+VSW +++ + +GL +K F+ R+ G PD TFL +L +C G+ Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK-VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGV 250
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP394_ARATH (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.406e-13 Identity = 44/163 (26.99%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPF--VANCLIDMYSRSGDIDTARVVFD---NLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 ++D+ +W MI Y+Q+ AL LF +M + VKP+A T G++ H Y+ + + P + +IDMY++ G I+TA +F N+ + W +++ G HG A + ++ + P+ +TF+G+L AC H+G+ Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQ-VKPDAITMVSVFSAISSLGSLEEGKRAHDYL---NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGL 557
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP242_ARATH (Putative pentatricopeptide repeat-containing protein At3g18840 OS=Arabidopsis thaliana GN=PCMP-E92 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.406e-13 Identity = 46/166 (27.71%), Postives = 80/166 (48.19%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +FD+++ KN + WT M Y N D++ + F ++ P++ G++IH + LR M V +DMYS+ G+++ A +FD+ +R+ V + +++ G HG K+ F+ M + G PD +TF+ LL AC H G+ Sbjct: 348 LFDSLSEKN--LVVWTAMFLGYL-NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT-AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGL 509 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |