BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP205_ARATH (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 52/158 (32.91%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEG-LAPDGVTFLGLLYACSHSGM 541 +DV +W +I ++ NG A+ ++ F M ++ +P+A + H+YV++ ++ PF+ L+++YSR G + A VF+ + ++ V WTSL+TGYG+HG G KA F+ M K + P+ VTFL +L ACSH+G+ Sbjct: 328 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN-TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSN-PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 483 HSP 2 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLGLLYACSHSG 538 +F IA K DV +W+ +I Y QNG A +AL +F M D +PN T GR+ H +R E + V+ L+DMY + + A VF + +++VVSW +L++G+ ++G+ ++ F M E PD + + +L +CS G Sbjct: 220 LFKMIAEK--DVISWSTVIACYVQNGAAAEALLVFNDMM--DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK-VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 380
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170 OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 54/158 (34.18%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVA-NCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R + +W +IG + G AN+A+ +F M + ++P+ FT Q+H VL+ + E + N LIDMY + G +D A +F+ ++QRNVVSW+S++ GY +G +A F QMR+ G+ P+ +TF+G+L AC H G+ Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSG--LEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGL 336
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP259_ARATH (Putative pentatricopeptide repeat-containing protein At3g28640 OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 57/174 (32.76%), Postives = 92/174 (52.87%), Query Frame = 2 Query: 20 RVLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQM-RKEGLAPDGVTFLGLLYACSHSG 538 ++L+ R +FD I DV W V++ Y + G ++ L +F +M K ++P+ F+ G+ IH +V + + FV L+DMY++ G I+TA VF L +RNV SW +L+ GY +G KA +++ R++G+ PD V LG+L AC+H G Sbjct: 166 KLLLDARKVFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFREMLV--KGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP212_ARATH (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.017e-19 Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNG-GANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 + +FD + PK RD+ +W ++ YS+ G LF +M +K VKP+ T GR +H V+R Q + F+++ LIDMY + G I+ A +VF +++V WTS++TG HG G +A F +M++EG+ P+ VT L +L ACSHSG+ Sbjct: 320 QAVFDQM-PK-RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK-VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKG-DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.329e-19 Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 RD +WT+MI Y + G N++L +F +M Q + P+ FT G I Y+ +N+ + + V N LIDMY + G + A+ VF ++ QR+ +WT+++ G +G G +A F QM+ + PD +T+LG+L AC+HSGM Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREM--QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV-VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484 HSP 2 Score: 67.781 bits (164), Expect = 3.874e-11 Identity = 46/186 (24.73%), Postives = 82/186 (44.09%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHG-------------LGDKAHWA------------------FDQMRKEGLAPDGVTFLGLLYACSHSG 538 DV +W +MI Y++ +++ L +M + LV P + T +++H YV + E + + N L++ Y+ G++D A +F ++K R+V+SWTS++ GY G + D+ W F +M+ G+ PD T + +L AC+H G Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEM--ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR-LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP231_ARATH (Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.329e-19 Identity = 54/163 (33.13%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 59 APKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRN---QYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 A RD+ TW ++ + G + LALF +M ++P+ T GR+IH Y++ + + F+ N L+DMY + GD+ AR+VFD+++ ++ SW ++ GYG+ G+ A F M + G+ PD +TF+GLL ACSHSG Sbjct: 322 AMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG--IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.329e-19 Identity = 58/168 (34.52%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD + K DV W MIG Q DALALF +M Q KP+ T G IH Y+ + + + + L+DMY++ G+I A VF ++ RN +++T+++ G +HG A F++M G+APD +TF+GLL AC H GM Sbjct: 343 RKLFDDMEEK--DVVLWNAMIGGSVQAKRGQDALALFQEM--QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVA-LGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505 HSP 2 Score: 88.1965 bits (217), Expect = 2.770e-17 Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE 478 RD+ +W +I Y + G A A+ ++ M + + VKP+ T G++ + YV N M IP V N L+DM+S+ GDI AR +FDNL++R +VSWT++++GY GL D + FD M ++ Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLM--ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV-NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352 HSP 3 Score: 86.2705 bits (212), Expect = 1.053e-16 Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLV-KPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +N ++ +W V I +S++ ++ L+ QM + +P+ FT G I +VL+ + E L+ V N I M++ GD++ AR VFD R++VSW L+ GY G +KA + + M EG+ PD VT +GL+ +CS G Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE-LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLG 271
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP406_ARATH (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.735e-19 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 20 RVLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +VL RV D A +++ T ++ +Y Q+ +AL LF +M K V PN +T G +H VL++ Y + V N L++MY++SG I+ AR F + R++V+W ++++G HGLG +A AFD+M G P+ +TF+G+L ACSH G Sbjct: 287 KVLYAQRVFDDTHA---QNIFLNTTIMDAYFQDKSFEEALNLFSKM--DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHV-MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP245_ARATH (Pentatricopeptide repeat-containing protein At3g21470 OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.735e-19 Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 RD+ W +I Y+QNG ++DA+ F M Q + +P+A T GR++H+ + E L FV+N LIDMY++ GD++ A VF+++ R+V S+++ +HG G +A F M L PD +TF+ +L AC H G Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNM--QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE-LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGG 389
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.960e-19 Identity = 55/169 (32.54%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEG-LAPDGVTFLGLLYACSHSGM 541 R +FD++ K R+ A+W +I + +NG +AL LF M +Q V+P T G+Q+HA ++R Q+++ + +VA+ L+ MY + G++ ++++FD ++++ W S+++GY HGLG++A F +M G P+ VTF+ L ACS++GM Sbjct: 285 RRVFDSM--KERNDASWQTVIKIHERNGFELEALDLFILMQKQG--VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV-YVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |