BQ623261

Overview
NameBQ623261
Unique NameBQ623261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.171e-27
Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 2
Query:  227 SDLWTERLADPFRVLEQIPFELE--RDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            +DLW    ADPF     I   +     ET A + ARVDWKETPE H   +D+PGVK++E+K+EVE+  VL VSG          D+WHRVERS GKF R+F+LP++  ++ V+A LENGVLT+++ K
Sbjct:   14 ADLW----ADPFDTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPK 136          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.171e-27
Identity = 61/130 (46.92%), Postives = 85/130 (65.38%), Query Frame = 2
Query:  215 RSLLSDLWTERLADPF-RVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            RS + D ++  L DPF  V   +      ++T A + AR+DWKETPE H    D+PGVK++E+K+EVEE  VL +SG          D+WHRVERS G+F R+F+LP+N  +D V+A LENGVLT+++ K
Sbjct:    6 RSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPK 135          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27
Identity = 59/139 (42.45%), Postives = 88/139 (63.31%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+  F    RS + D ++  + DPF+    +P      E  A    RVDWKETPE H    D+PG+K++E+K+++E++RVL++SG          D WHRVERS GKF R+F+LP+N  ++ V+A +ENGVLT+++ K
Sbjct:    2 SLIPGFFGGRRSNVFDPFSLDMWDPFKDFH-VPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPK 139          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27
Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELER------DETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+  F    RS + D ++  + DPF+     PF           E  A    RVDWKETPE H    D+PG+K++E+K+E+E++RVL++SG          DQWHR+ERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:    2 SLIPSFFGGRRSNVFDPFSLDVWDPFK---DFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK 143          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27
Identity = 59/134 (44.03%), Postives = 87/134 (64.93%), Query Frame = 2
Query:  200 FADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            F +  RS + D ++  + DPF+ L       E     A+  ARVDW+ETPE H    D+PG+K++E+K+E+EE+ VL++SG          D WHRVERS G+F R+F+LP+NV +D V+A +ENGVLT+++ K
Sbjct:    8 FNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENS---AIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPK 138          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27
Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = 2
Query:  215 RSLLSDLWTERLADPF-RVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            RS + D ++  L DPF  V   +      ++T A + AR+DWKETPE H    D+PGVK++E+K+EVEE  VL +SG          D+WHRVERS G+F R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:    6 RSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPK 135          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.152e-26
Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERD------ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+  F    RS + D ++  + DP   L+  PF           E  A    RVDWKETPE H    D+PG+K++E+K+EVE++RVL++SG          D+WHRVERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:    2 SLIPSFFSGRRSNVFDPFSLDVWDP---LKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPK 143          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.152e-26
Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 2
Query:  227 SDLWTERLADPFRVLEQ--IPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            +D W     DPF  + +  +P   +RD T A + ARVDWKETPE H    D+PGVK++E+K+EVEE  VL +SG          D+WHRVERS G+F R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:   14 ADFW-----DPFDGVFRSLVPATSDRD-TAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPK 134          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.352e-26
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            E  A    R+DWKETPE H    D+PG+K++E+K+E+E++RVL++SG          DQWHRVERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:   29 ENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK 128          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.378e-26
Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+      PRS + D ++  + DPF+    +P      E  A    RVDWKET E H +  D+PG+K++E+K+++E++RVL++SG          D WHRV+RS GKF R+F+LP+N  ++ V+A +ENGVLT+++ K
Sbjct:    2 SLIPSIFGGPRSNVFDPFSLDMWDPFKDFH-VPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPK 139          
The following BLAST results are available for this feature:
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS16A_WHEAT5.171e-2748.8216.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16A_ORYSJ5.171e-2746.9216.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HSP14_SOYBN8.821e-2742.4517.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA8.821e-2742.7618.2 kDa class I heat shock protein OS=Medicago sa... [more]
HS17B_ARATH8.821e-2744.0317.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HS16B_ORYSJ8.821e-2746.1516.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HSP11_PEA1.152e-2643.4518.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HS16C_ORYSJ1.152e-2648.0316.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HSP11_MEDSA3.352e-2651.0018.1 kDa class I heat shock protein (Fragment) OS=... [more]
HSP15_SOYBN4.378e-2641.0117.6 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00352 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00352 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623261 ID=BQ623261; Name=BQ623261; organism=Citrus sinensis; type=EST; length=626bp
TGTCAATATCTATCTAGCTTCAAGCCTCTCTACCAACAAGCACATTACAT
ATAATACATCAAGCACAAAGCCAAAAAGGAAGGAAGAAATGAGGCAGCAA
CAACAAACACGGCCCTTTAATGTTAATTTGCTGCCAATGCTGCTCTTGGC
AATATTGGCATGTCTTGTGGGCTCATCAAATGGCTCTCTGCTGACGCCCT
TCGCTGATCGTCCGAGGAGTCTGTTATCCGATCTCTGGACAGAACGTTTG
GCAGACCCCTTCCGGGTGCTAGAGCAAATCCCATTTGAGCTCGAGAGGGA
CGAGACCATGGCGCTATCTCCCGCTAGAGTGGACTGGAAAGAGACACCGG
AGGGTCACTTCATAATGCTGGATGTACCGGGGGTGAAGAGGGACGAGCTG
AAGATTGAAGTTGAGGAGAATCGCGTGCTGCGAGTGAGCGGAGAGAGGAA
ACGGGAGGAGGAGAAGAAGGGCGATCAGTGGCACAGAGTGGAGAGATCCC
ATGGCAAGTTTTGGAGGCAGTTCAAGCTGCCGGACAATGTGGATTTAGAT
TCTGTACAGGCTAAGCTTGAAAATGGGGTGCTCACTTTGTCCTTGAAAAA
GCTGTCACCTGACCAGATCAAAGGTC
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