BQ623261

Overview
NameBQ623261
Unique NameBQ623261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15
Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXX-GDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            + MA +PA  D  E P  +  ++D+PG+K DE+K++VE + VL VSG          G ++ R+ER  GKF R+F+LP+N DLD + A   +GVL ++++KL P + K
Sbjct:   40 KAMAATPA--DVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPK 145          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14
Identity = 42/105 (40.00%), Postives = 67/105 (63.81%), Query Frame = 2
Query:  308 MALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            MA++PA  D KE P  +  ++D+PG+   ++K++VE+ RVL +SG           ++ R+ER  GKF R+F LPDN D+D + A   +GVLT++++KL P + K
Sbjct:   50 MAVTPA--DVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREEREDA-KYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPK 151          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.254e-14
Identity = 39/105 (37.14%), Postives = 67/105 (63.81%), Query Frame = 2
Query:  308 MALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            MA +PA  D KE P  +  ++D+PG+K  ++K++VE + VL +SG         G ++ R+ER  GKF ++F LP++ + D + A  ++GVLT++++KL P + K
Sbjct:   48 MAATPA--DVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPK 150          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.254e-14
Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 2
Query:  308 MALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQ----WHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            MA +PA  D K+ P  +  ++D+PG+K  ++K++VEE R+L +SG           +    + R+ER  GKF R+F LPDN D+D + A  ++GVLT++++KL P + K
Sbjct:   50 MAATPA--DVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPK 156          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14
Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXX-GDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            + MA +PA  D  E P+ +   +D+PG+K DE+++++E   VL VSG          G ++ R+ER  GKF R+F+LPDN DL+ + A   +GVL +++ KL P + K
Sbjct:   41 KAMAATPA--DVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPK 146          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGD--QWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            + MA +PA  D KE P  +  + D+PGVK  E+K++VE++ VL VSG          D  ++ R+ER  GKF R+F LP+N +++++ A  ++GVL ++++KL P + K
Sbjct:   51 KAMAATPA--DVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPK 157          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13
Identity = 37/107 (34.58%), Postives = 67/107 (62.62%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            + MA +PA  D KE P  +   +D+PG+K  ++K++VE++ +L + G         G ++ R+ER  GK  R+F LP+N + D++ A  ++GVL+++++KL P + K
Sbjct:   45 KAMAATPA--DVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPK 149          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 2
Query:  308 MALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            MA +PA  D KE    +  ++D+PG+   +++++VE+ RVL +SG           ++ R+ER  GKF R+F LPDN D+D V A   +GVLT++++KL P + K
Sbjct:   43 MAATPA--DVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREEREDA-KYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPK 144          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 2
Query:  284 FELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVER-----SHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            +   R +  + S A +DW E+   H   ++VPG  ++++K+++EE  VL + G            WH  ER        +F R+ +LP+NV +D V+A +ENGVLT+ + K
Sbjct:    9 YPFRRFQEWSRSTALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPK 119          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12
Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 2
Query:  257 PFR-VLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQ------WHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            PFR +L   PF    D   A + A +DW ETP  H + ++VPG+ +D++K++VE+  VL V G           +      WH  ER   +F R+  LP  V ++ ++A ++NGVLT+ + K
Sbjct:    9 PFRRILYGRPFP--PDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPK 128          
The following BLAST results are available for this feature:
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS176_ARATH7.746e-1540.7417.6 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP21_MAIZE1.726e-1440.0017.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_HELAN2.254e-1437.1417.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ2.254e-1438.5318.0 kDa class II heat shock protein OS=Oryza sati... [more]
HS177_ARATH3.844e-1438.8917.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP22_IPONI1.118e-1338.5318.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_SOYBN1.908e-1334.5817.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP23_MAIZE4.250e-1339.0517.0 kDa class II heat shock protein OS=Zea mays G... [more]
HS157_ARATH9.468e-1332.4315.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP16_ORYSJ2.109e-1234.4316.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00352 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00352 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623261 ID=BQ623261; Name=BQ623261; organism=Citrus sinensis; type=EST; length=626bp
TGTCAATATCTATCTAGCTTCAAGCCTCTCTACCAACAAGCACATTACAT
ATAATACATCAAGCACAAAGCCAAAAAGGAAGGAAGAAATGAGGCAGCAA
CAACAAACACGGCCCTTTAATGTTAATTTGCTGCCAATGCTGCTCTTGGC
AATATTGGCATGTCTTGTGGGCTCATCAAATGGCTCTCTGCTGACGCCCT
TCGCTGATCGTCCGAGGAGTCTGTTATCCGATCTCTGGACAGAACGTTTG
GCAGACCCCTTCCGGGTGCTAGAGCAAATCCCATTTGAGCTCGAGAGGGA
CGAGACCATGGCGCTATCTCCCGCTAGAGTGGACTGGAAAGAGACACCGG
AGGGTCACTTCATAATGCTGGATGTACCGGGGGTGAAGAGGGACGAGCTG
AAGATTGAAGTTGAGGAGAATCGCGTGCTGCGAGTGAGCGGAGAGAGGAA
ACGGGAGGAGGAGAAGAAGGGCGATCAGTGGCACAGAGTGGAGAGATCCC
ATGGCAAGTTTTGGAGGCAGTTCAAGCTGCCGGACAATGTGGATTTAGAT
TCTGTACAGGCTAAGCTTGAAAATGGGGTGCTCACTTTGTCCTTGAAAAA
GCTGTCACCTGACCAGATCAAAGGTC
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