BQ623278

Overview
NameBQ623278
Unique NameBQ623278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12
Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 3
Query:   21 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSA--DFGDN-NLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 371
            +AGT GYV PEY  + R S K DVYSYGVVLLELL+ K+  D +   +G+  N+V W     +  +  + F   L    P+   +L++ LH+A  C  D    RPTM QV+   K++Q  S
Sbjct: 1032 VAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFNIVQWACMLLRQGRAKEFFTAGLWDAGPH--DDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPS 1150          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 3
Query:   27 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIE--IELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQS 389
            GT GYV PE   S   + + D+YS+G+VLLE+LTGKRP       D ++V WV KQ  + +++++ +P L++ DP      E L  + V   C    P  RPTM  V+ M +  + G  + S +
Sbjct: 1006 GTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMFTQ--DEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCTATDPLDRPTMSDVVFMLEGCRVGPDVPSSA 1127          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   27 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP---TDSADFGDNNLVGWVKQH-AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQ 386
            G  GYV PEY  +   S  GDVY +G+VLLE++TG++P    +  +    +LV WV +H +  +  D  D  +  +    + E++Q L +A +C+  RP  RP MIQV    K +    G  S+
Sbjct:  454 GKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAIDRRIFGK--GYDDEIMQVLRIACSCVVSRPKERPLMIQVYESLKNLGDQHGFFSE 575          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKIS---DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQ 335
            GY+ PEY  S + + K DVYS G+VL+E++TGK PTDS    + ++V WV+ H ++  S    + DP+L    P  E    Q L +A  C    P  RP+  Q
Sbjct: 1128 GYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPSSRQ 1230          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGW----VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 359
            GY PPE  ++   + + DVYS+GVVLLEL++GK+P       + +LV W    V+Q   L+  D    E + ED     E+ + + +   C  D PW+RPTM QV+ + K+I
Sbjct:  682 GYTPPEQERNASPTLESDVYSFGVVLLELVSGKKP-------EGDLVNWVRGLVRQGQGLRAIDPTMQETVPED-----EIAEAVKIGYLCTADLPWKRPTMQQVVGLLKDI 781          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN---LVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 377
            + + GT G++ PEY  + + S K DV+ YG++LLEL+TG+R  D A   +++   L+ WVK   K  K+  + DP+L       E+E  Q + VA  C    P  RP M +V+ M +    G GL
Sbjct:  466 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVE--QLIQVALLCTQSSPMERPKMSEVVRMLE----GDGL 584          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 356
            +T+AGT GY+ PE Y S R   K DVYS+G+VLLE++T  +P  +   GD+++  WV  Q  +  I ++ DP L K D NI     + L +A +C      +RP+M QV+   KE
Sbjct:  724 TTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMIT-NQPVINQTSGDSHITQWVGFQMNRGDILEIMDPNLRK-DYNIN-SAWRALELAMSCAYPSSSKRPSMSQVIHELKE 835          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD---NNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 347
            H   S +AGT GY+ PEY    + S K DV+S+GV+++E++TGKR  +    GD    +L+ WV +   +  I  V DP L     N   E+L+ +H+   C+ +    RPTM  V  M
Sbjct:  515 HRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSRN---EILRCIHIGLLCVQESAATRPTMATVSLM 630          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12
Identity = 50/140 (35.71%), Postives = 83/140 (59.29%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-----NLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDE 407
            HL+   +AGT GYV PEY+QS + + K DVYS+GVVL+ELLTG++P+      +N     + V  VK++  L I D    + +K++ N++ +++   ++A  CL+ +  +RP M +V    + I++ S  DS   I  D+
Sbjct:  572 HLTTQ-VAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVD----DRIKDECNMD-QVMSVANLARRCLNRKGKKRPNMREVSIELEMIRS-SHYDSGIHIEDDD 704          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWV-KQHAKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFGTVEMVEMSIQEAPELS 467
            H+S + +AGTPGY+ PEYY++   S K DVYS+GVVLLE++T +  TD       ++  WV     K  I  + DP+LM + D N   ++++   +A AC++    RRPTM  V+    E  A      Q        G+     V+ S   A E S
Sbjct:  722 HVS-TVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTR-ERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVE---LALACVNPSSNRRPTMAHVVTELNECVALENARRQGREEMHTSGY-----VDFSRSSASEFS 868          
The following BLAST results are available for this feature:
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RPK2_ARATH1.188e-1240.50LRR receptor-like serine/threonine-protein kinase ... [more]
Y4361_ARATH2.027e-1236.29Probable LRR receptor-like serine/threonine-protei... [more]
Y1699_ARATH2.027e-1234.68Probable LRR receptor-like serine/threonine-protei... [more]
GSO1_ARATH2.027e-1238.83LRR receptor-like serine/threonine-protein kinase ... [more]
Y5815_ARATH2.648e-1237.50Probably inactive leucine-rich repeat receptor-lik... [more]
SERK2_ARATH2.648e-1236.00Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
RLK7_ARATH2.648e-1240.00Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK29_ARATH2.648e-1236.13Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
WAKLB_ARATH3.458e-1235.71Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
Y5188_ARATH4.516e-1235.03Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00369 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00369 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623278 ID=BQ623278; Name=BQ623278; organism=Citrus sinensis; type=EST; length=704bp
CACATTTGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCC
GAATACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTA
TGGTGTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAG
CAGATTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAG
CTGAAAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAA
CATCGAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGG
ATGATCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTT
AAAGAAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCAC
TGATGAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAG
AAGCTCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAA
GCATTCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTG
CCTTTGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAA
AATTCTTGTTATTTATACATAAAAAAAAAAAAGTTGCTTTTAACTTTGTT
ATCGAATGTGTAAATATACAACCCCAAGTTTGTTATGCTATCTTGGTTCT
TTAA
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