BQ623285

Overview
NameBQ623285
Unique NameBQ623285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11
Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVV 397
            DHKP    E  R++ AGG V+     R+ G LA SR++GD   K           V  +P+V    R++ DEF+ILA DG+WDV+SNE  C+ V+     R++ +  ++                  + +GS DN+S+++V
Sbjct:  168 DHKPCNPREKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVK----SRLEVSDDLE--------NVCNWVVDTCLHKGSRDNMSIVLV 293          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11
Identity = 48/120 (40.00%), Postives = 63/120 (52.50%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVI--------------NWNGPRILGVLATSRSIGDQYLKPF-VISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASS-VDAGNQ 313
            D KPD   E  R+    GRV               N N P     LA +R+ GD  LK F +IS PDV   + +++DEF++LA+DG+WDV+SN+    VV  C SGR   A S VD  N+
Sbjct:  221 DLKPDHPREARRIRRCNGRVFAHQDEPDVARLWLPNCNSPG----LAMARAFGDFCLKDFGLISVPDVTYRQITEKDEFIVLATDGVWDVLSNQEVVDVVASC-SGRFAAARSVVDLANE 335          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVV 397
            DHKP    E  R++ AGG V+     R+ G LA SR++GD   K           V  +P+V    R++ DEF++LA DG+WDV+SNE  C+ V+     R++ +  ++                  + +GS DN+SV++V
Sbjct:  168 DHKPCNPVEKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVK----SRLEVSDDLE--------NVCNWVVDTCLHKGSRDNMSVVLV 293          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP--RILGVLATSRSIGDQYLKPFVISKPDVM-VTERSDRD-EFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVEL 403
            DH P R DE  R+E+ GG V        R+   LA SR+ GD  +K +V  +P+   V+  +D D  FL+LASDGLW  VSN+ A   V    +     A++  AG+ +P             SRGS D+I+V+VV+L
Sbjct:  287 DHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAVDAVAAAAA-----AAAGVAGSTDPCKELAAMAR----SRGSRDDITVMVVDL 415          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C67_ARATH (Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 48/142 (33.80%), Postives = 69/142 (48.59%), Query Frame = 2
Query:   80 RILGVLATSRSIGDQYLK---------------------PFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVV----RRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELN-KPTKFNS 427
            R+ GV+  +RSIGD YLK                     P + + P V +T  S +DEF+ILASDGLW+ +SN+ A  +V    R+  + R+  A+  +A  +              + R   D+I+VIVV LN  P K NS
Sbjct:  212 RVKGVIQVTRSIGDAYLKRAEFNREPLLPKFRLPEHFTKPILSADPSVTITRLSPQDEFIILASDGLWEHLSNQEAVDIVHNSPRQGIARRLLKAALKEAAKKREMRYSDLTEIHPGVRRHFHDDITVIVVYLNPHPVKTNS 353          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNG--PRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVR 259
            DH+P++  E   +E  GG V N  G  PR+ G LA +R+ GD+ LK  + S+PDV+     +  +FLILASDGLW V+SN+ A   ++
Sbjct:  171 DHEPNK--ERHSIEKKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWKVMSNQEAVDEIK 256          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C51_ARATH (Probable protein phosphatase 2C 51 OS=Arabidopsis thaliana GN=At3g63340 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 48/138 (34.78%), Postives = 72/138 (52.17%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNG-PRILGVLATSRSIGDQYLKPF-VISKPDVMVTE-RSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQN-PXXXXXXXXXXXXISRGSSDNISVIVVEL 403
            DH P+R DE  RVEAAGG V  W G PR+ G L  SR+IGD   + + VIS P+VM  +     D FL+++SDG+++ +  +  C ++       +   +S  AG  +                +GS DN++ +VV L
Sbjct:  313 DHHPNREDEKIRVEAAGGYVTEWAGVPRVNGQLTVSRAIGDLTYRSYGVISAPEVMDWQPLVANDSFLVVSSDGIFEKLEVQEVCDLL-----WEVNNQTSSGAGVPSYCSISLADCLVNTAFEKGSMDNMAAVVVPL 445          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKP---------FVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRR 262
            DHKP    E  R++ AGG V      RILG+LATSR+IGD   K           V   PD+ V   +D  EFL++ASDG+WD + N    Q VR+
Sbjct:  179 DHKPHHEAERERIQRAGGHVFL---QRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQ 271          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVV 397
            DHKP    E  R++ AGG V+     R+ G LA SR++GD   K           V  +P+V    R++ DEF++LA DG+WDV+SNE  C+ V    + R++ +  ++                  + +GS DN+S+++V
Sbjct:  168 DHKPCNPMEKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFV----NSRLEVSDDLE--------NVCNWVVDTCLHKGSRDNMSIVLV 293          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNG--PRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRR 262
            DH+P    E + +E  GG V N  G  PR+ G LA SR+ GD+ LK  + S+PD+       + + L+LASDG+W V++NE A ++ RR
Sbjct:  163 DHEP--RTERSSIEDRGGFVSNLPGDVPRVNGQLAVSRAFGDKGLKTHLSSEPDIKEATVDSQTDVLLLASDGIWKVMTNEEAMEIARR 249          
The following BLAST results are available for this feature:
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PPM1B_BOVIN2.381e-1132.62Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
P2C75_ORYSJ2.381e-1140.00Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]
PPM1B_MOUSE3.109e-1132.62Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
P2C77_ORYSJ4.061e-1137.68Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C67_ARATH5.304e-1133.80Probable protein phosphatase 2C 67 OS=Arabidopsis ... [more]
P2C62_ORYSJ5.304e-1143.18Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C51_ARATH5.304e-1134.78Probable protein phosphatase 2C 51 OS=Arabidopsis ... [more]
P2C21_ORYSJ5.304e-1142.71Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PPM1B_RAT6.927e-1131.91Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
P2C09_ARATH6.927e-1141.57Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00376 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00376 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623285 ID=BQ623285; Name=BQ623285; organism=Citrus sinensis; type=EST; length=632bp
TGATCATAAGCCTGACAGACATGATGAACTGACAAGAGTAGAAGCTGCTG
GAGGAAGGGTCATAAACTGGAACGGCCCCCGAATCTTAGGAGTTCTTGCC
ACCTCCAGATCTATAGGCGATCAATACTTGAAACCATTTGTGATATCAAA
GCCAGATGTGATGGTGACTGAAAGAAGCGACCGCGATGAATTCCTCATAC
TTGCTAGCGATGGCTTATGGGATGTTGTATCAAATGAAGCAGCATGCCAA
GTCGTGAGGAGATGTTTCAGCGGCCGGATAAAATGGGCATCCTCCGTCGA
CGCCGGGAACCAAAACCCCGCTGCCAGAGCAGCAGCAGTGCTGGTCGAGC
TAGCCATCTCTCGGGGCAGCAGTGACAATATAAGCGTCATAGTAGTTGAG
CTAAATAAACCTACCAAGTTTAATTCCTAGTGCATCATAAAATTTAATAA
ACAGCAACAGAAGTTCGTTTTCGAAGATTTTAACCATTGTTTTGTTTAGG
TAGAAACCATGTTTTCAATTCAGAAAATGAACCGAGAGCGGCGGGAGCTC
TGTTGAATTGACGAGCTTTTCAGGGGGATTTGTTGGATGTAACATTTAAT
TCATTTGGTCAACTTTAAATTGTTCTTTTTTT
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