BQ623285

Overview
NameBQ623285
Unique NameBQ623285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 2 
Query:    2 DHKPDRHDELTRVEAAGGRVINWNG--PRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRR 262
            DH P+   E + +E  GG V N  G  PR+ G LA SR+ GD+ LK  + S+PD+ V +     E L+LASDGLW V++N+    V +R
Sbjct:  165 DHDPNV--ERSAIENRGGFVSNMPGDVPRVCGQLAVSRAFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKR 251
The following BLAST results are available for this feature:
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
P2C41_ORYSJ9.047e-1142.70Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00376 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00376 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623285 ID=BQ623285; Name=BQ623285; organism=Citrus sinensis; type=EST; length=632bp
TGATCATAAGCCTGACAGACATGATGAACTGACAAGAGTAGAAGCTGCTG
GAGGAAGGGTCATAAACTGGAACGGCCCCCGAATCTTAGGAGTTCTTGCC
ACCTCCAGATCTATAGGCGATCAATACTTGAAACCATTTGTGATATCAAA
GCCAGATGTGATGGTGACTGAAAGAAGCGACCGCGATGAATTCCTCATAC
TTGCTAGCGATGGCTTATGGGATGTTGTATCAAATGAAGCAGCATGCCAA
GTCGTGAGGAGATGTTTCAGCGGCCGGATAAAATGGGCATCCTCCGTCGA
CGCCGGGAACCAAAACCCCGCTGCCAGAGCAGCAGCAGTGCTGGTCGAGC
TAGCCATCTCTCGGGGCAGCAGTGACAATATAAGCGTCATAGTAGTTGAG
CTAAATAAACCTACCAAGTTTAATTCCTAGTGCATCATAAAATTTAATAA
ACAGCAACAGAAGTTCGTTTTCGAAGATTTTAACCATTGTTTTGTTTAGG
TAGAAACCATGTTTTCAATTCAGAAAATGAACCGAGAGCGGCGGGAGCTC
TGTTGAATTGACGAGCTTTTCAGGGGGATTTGTTGGATGTAACATTTAAT
TCATTTGGTCAACTTTAAATTGTTCTTTTTTT
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