BQ623303

Overview
NameBQ623303
Unique NameBQ623303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length434
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:626..1059. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.146e-29
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 2
Query:    2 AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            AEGE KFHSFHPVA+ILSYL+KAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  447 AEGESKFHSFHPVASILSYLSKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.721e-29
Identity = 62/64 (96.88%), Postives = 62/64 (96.88%), Query Frame = 2
Query:    2 AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            AE E KFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  449 AEEEDKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 512          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.778e-29
Identity = 59/64 (92.19%), Postives = 63/64 (98.44%), Query Frame = 2
Query:    2 AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            +E EGKFHSFHPVAT+LSYL+KAPLVPPGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  447 SENEGKFHSFHPVATLLSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.497e-28
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 2
Query:    2 AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            AEGE K HSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  447 AEGEDKLHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.497e-28
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 2
Query:    2 AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            +E EGKFHSFHPVAT LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  447 SEKEGKFHSFHPVATKLSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.028e-17
Identity = 39/56 (69.64%), Postives = 51/56 (91.07%), Query Frame = 2
Query:   26 SFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  452 TFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.519e-17
Identity = 38/56 (67.86%), Postives = 51/56 (91.07%), Query Frame = 2
Query:   26 SFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRAC+GL P+N+M+LE+K
Sbjct:  452 TFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHK 507          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.902e-17
Identity = 38/55 (69.09%), Postives = 49/55 (89.09%), Query Frame = 2
Query:   29 FHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  453 FHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.708e-17
Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 2
Query:   26 SFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  452 SFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.717e-16
Identity = 39/63 (61.90%), Postives = 52/63 (82.54%), Query Frame = 2
Query:    5 EGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            E + +F +FH V +ILS+L KAPLVP GTPVVNA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  442 ETDQEFQTFHSVLSILSFLCKAPLVPAGTPVVNAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
The following BLAST results are available for this feature:
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
INO1_SPIPO5.146e-2995.31Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_MESCR6.721e-2996.88Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO3_ARATH8.778e-2992.19Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_HORVU1.497e-2893.75Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_BRANA1.497e-2895.31Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_HUMAN2.028e-1769.64Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MACFA4.519e-1767.86Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_RAT5.902e-1769.09Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_BOVIN7.708e-1767.86Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1B_XENLA1.717e-1661.90Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00394 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00394 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623303 ID=BQ623303; Name=BQ623303; organism=Citrus sinensis; type=EST; length=434bp
AGCTGAAGGAGAGGGAAAATTCCACTCTTTCCACCCTGTGGCTACAATTC
TCAGCTACCTCACCAAGGCTCCTCTGGTCCCTCCAGGCACACCAGTGGTG
AATGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAACATTCTGAGGGCTTG
CGTTGGCTTGGCTCCTGAGAACAACATGATTTTGGAATACAAGTGAAGAA
CTTGCAGGGGAGAAAAGTGGAAGAACCGGTATTCCCTTTCTCTGTCACCA
ATCAAAGCTGTGGTGGTCCATTTAATTACTGATTGTAATGTCTTGTGTCA
TGAAATTGTGGTTAATATTAGTGTCCTGTATGTTTGCTCTTTTATTTTTT
TAATGAAGGTGCTGGAGTGTAGCCCATTGCCTTTGTAGCTCATTTCGGAG
CATGCAATCTCTTGTATTGCAAGTAGATAATATA
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