BQ623325

Overview
NameBQ623325
Unique NameBQ623325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4610 contig Csv1_Contig4610:526..1036. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13
Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAA-FYHQFI 409
            GY+    L  E++ TF+ +  +  +TD  R A        AP+ IG ++ ++HL +IPVT T +NPARS G A ++  + A  + W+FW+ P +GAA+A  FYH F+
Sbjct:  129 GYTLLACLVCEVVMTFMFLMIILGSTD--RRAPKG----FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPA-LFVGDWAIAELWLFWLAPIVGAALAGLFYHAFL 228          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.094e-13
Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 2
Query:   83 LADGYSTGTGLGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            LA G   G  +  E + TF  VY  ++   DPKR     H+  +APL +GF +    LA  P  G G+NPAR  G A++  +   W   W++W+GPF+GA +A   ++++L
Sbjct:  144 LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRG----HLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.094e-13
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 2
Query:   77 NELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAP-LPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            N L +  + G  +  E+I TF L   +F++TD +R +     PV +P L IG +V + HL  I  TG  +NPARS G AV+ ++       W+FWVGP +GA +AA  + ++L
Sbjct:  120 NALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PAHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 2
Query:   92 GYSTGTGLG------AEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            G++  +G+G       E   TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR  G A++  +   W   W++W+GPF+GA +A   +++++  SA  A
Sbjct:  137 GFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGLLYEYLVIPSADAA 250          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 2
Query:   83 LADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRA 418
            LA G +   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G AV  + +  W + W++W GP +G  +A   ++ + RA
Sbjct:  138 LAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 2
Query:   71 GANELADG-YSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            G  EL+ G YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IPVT T +NPARS G A +++   A    W+FWV P +GA I A   + +L
Sbjct:  118 GYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 2
Query:   71 GANELADG-YSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            G  EL+ G YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IPVT T +NPARS G A +++   A    W+FWV P +GA I A   + +L
Sbjct:  118 GYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13
Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 2
Query:   83 LADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYH 400
            +A G +   G+  EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+      +   WI+W GP IG  +A F +
Sbjct:  133 VAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13
Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 2
Query:   68 GGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQ--WIFWVGPFIGAAIAAFYHQFI 409
            G A     GYS    L  E++ T   +  +  ATD +  A        APL IG A+ ++HL +IPVT T +NPARS G A+       W  Q  W+FW+ P IGA + A  ++ I
Sbjct:  118 GYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 2
Query:   71 GANELADG-YSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            G  EL+ G YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IPVT T +NPARS G A +++   A    W+FWV P +GA I A   + +L
Sbjct:  118 GYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
The following BLAST results are available for this feature:
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AQPZ_GLOVI1.603e-1338.32Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
TIP32_MAIZE2.094e-1336.04Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQP5_HUMAN2.094e-1338.05Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP31_ORYSJ2.734e-1334.71Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQP_CICVR2.734e-1335.71Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQPZ_BRUAB2.734e-1338.26Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA22.734e-1338.26Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
TIP2_TOBAC3.571e-1341.12Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
AQPZ_CHRVO3.571e-1337.07Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQPZ_BRUSU3.571e-1338.26Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00416 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00416 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623325 ID=BQ623325; Name=BQ623325; organism=Citrus sinensis; type=EST; length=512bp
TTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTA
CTACATCGAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTACAGC
ACTGGCACTGGATTGGGTGCTGAGATCATCGGTACCTTTGTTCTTGTCTA
CACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCACG
TTCCCGTCTTGGCGCCATTGCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCTACGATCCCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTT
GGGAGCTGCAGTGATTTACAGCAAGGAGAAGGCTTGGGATGATCAATGGA
TCTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCAC
CAATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAG
CCTCCTCCAACATTTAAATTAACTTTTAAAATAATTACTGGAGGATTAAT
CAATGGGTGTCA
back to top