BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SHEAM (Tryptophan synthase alpha chain OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSP-EEGLKELEKFAKSLKSA 403 + P D ++ + EG+ YL+S GVTGA + ++L +KE + P +GFGI++P VQ+ GA G I GSA+VK + + + L EL+ FA ++K+A Sbjct: 151 IFIAPPNASADTLRLVASLGEGYTYLLSRAGVTGADNKAGMPLDSVLSALKEFNAPPPLLGFGIAEPSQVQEAIAAGAAGAISGSAVVKRIEALKDDMPKLLTELKSFASAMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SALSV (Tryptophan synthase alpha chain OS=Salmonella schwarzengrund (strain CVM19633) GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQ-SPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ + G+ YL+S GVTGA + + L+ ++KE P GFGIS PE V GA G I GSA+V ++ + SPE+ L EL F ++K+A Sbjct: 139 FRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVNIIEKNHASPEQMLAELRSFVSAMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOPS (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain BisB5) GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 334 K L+ + TPTT R+ A++ + GFVY VS G+TG+ ++ S V + IK + PV VGFGI PE + +A ADG +VGSA++ L Sbjct: 146 KAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASADSAAVGDAVARIKRHTDLPVCVGFGIRTPEAARAIAA-EADGAVVGSALIDAL 241
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HELP2 (Tryptophan synthase alpha chain OS=Helicobacter pylori (strain P12) GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKE 370 K ++ + +P ++ S+G++Y ++ GVTGA + +++ +K S P +GFGIS+ EH++ GADGVI GSA+VK++ E + E + E Sbjct: 143 KHQIKQIFIASPNASVKDLEQAAMHSQGYIYTLARSGVTGASRILENDASAIIKTLKAFSPTPALLGFGISQKEHIKNAKEMGADGVICGSALVKIIEENLNNENAMLE 251
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CLOB8 (Tryptophan synthase alpha chain OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 83 TPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 T DR+ AI + ++GFVY VS+ G TG R ++ L E++++ P+ +GFGIS E V++V + DGVIVGSA+VK + EG + + F K L L Sbjct: 157 TSKDRIAAITKGAKGFVYCVSTNGTTGERKTLDSGTHEYLEEVRKNVDIPMCIGFGISSKEVVKEVKDY-CDGVIVGSAIVKRMA------EGKEAVIDFVKDLSDGL 257
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CAUCR (Tryptophan synthase alpha chain OS=Caulobacter crescentus GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKE-----LEKFAKSLKSA 403 ++L+ PTT R+ +V + GFVY VS GVTG +++ + V + ++++S PVAVGFGI P+ VA AD +VGSA+V + A E + E + AK+++SA Sbjct: 150 IALIRLAAPTTDDARLPMVVRRTSGFVYYVSVAGVTGVKSADAADVAPAVERLRKASGLPVAVGFGIRTPDQAAAVAK-VADAAVVGSALVDEIESAAQLNENVTEKVLLKASELAKAVRSA 270
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CAUCN (Tryptophan synthase alpha chain OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKE-----LEKFAKSLKSA 403 ++L+ PTT R+ +V + GFVY VS GVTG +++ + V + ++++S PVAVGFGI P+ VA AD +VGSA+V + A E + E + AK+++SA Sbjct: 150 IALIRLAAPTTDDARLPMVVRRTSGFVYYVSVAGVTGVKSADAADVAPAVERLRKASGLPVAVGFGIRTPDQAAAVAK-VADAAVVGSALVDEIESAAQLNENVTEKVLLKASELAKAVRSA 270
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRP_COPC7 (Tryptophan synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TRP-1 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 39/115 (33.91%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQ--TLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV---KLLGEAQSPE 355 +R+K LS V P+T R++ + ++ F+Y+VS +G TG+ A+++ + + T+L I+E + P+AVGFG++ + VA GADGV++GS +V K G+ + P+ Sbjct: 139 FRQKCAASNLSYVPLIAPSTTLKRIQFLASIADSFIYVVSKMGTTGSSANVAVNEELPTILSRIREYTHVPLAVGFGVATRDQFNYVADAGADGVVIGSRIVNAIKAAGDGEVPQ 253
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PHOLL (Tryptophan synthase alpha chain OS=Photorhabdus luminescens subsp. laumondii GN=trpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQS-PEEGLKELEKFAKSLKSA 403 +R K ++ + P + ++ I G+ YL+S GVTG + L+ +++E P GFGIS+P+ V++ GA G I GSA+VK++ E S PE LKEL +F +KSA Sbjct: 139 FRTAAMKHGIAPIFICPPDAEDELLREIASYGRGYTYLLSRAGVTGIERRGEKPLNHLVNKLREYHAAPPLQGFGISEPKQVKETLASGAAGAISGSAIVKIIEENLSQPEIMLKELTEFVSKMKSA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HAES2 (Tryptophan synthase alpha chain OS=Haemophilus somnus (strain 2336) GN=trpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG-HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 K + V P +KA+ E S+G++YLVS GVT A S ++ L++ +K+ + P+ GFGI++P+ V+ V G G I GSA+V+++ + E+ L EL +F + +K A Sbjct: 145 KYDIQPVFICPPNADETTLKAVAEKSKGYIYLVSRAGVTSAENQQSAKNLANLIKGLKKYGSAPILQGFGIAQPQQVKDVLKSGVAGAISGSAIVQIIEQNLTDREKCLSELAEFVQKMKQA 266 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |