BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_AZOBR (Tryptophan synthase alpha chain OS=Azospirillum brasilense GN=trpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 334 K ++ + TPTT R+ A+++ + GFVY VS G+TGA ++ + V + +K + PVAVGFGI PE +VA AD +VGSA+V L Sbjct: 155 KAGVNFIRLATPTTDDKRLPAVLQNTSGFVYYVSIAGITGAASADNAAVGAAVERLKRHTDLPVAVGFGIKTPEQAAEVAR-VADAAVVGSAIVTRL 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_XANC5 (Tryptophan synthase alpha chain OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQT-LLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 ++ L+L+ +PTT R+ + ++G++Y VS GVTGA + H + LR++++ + PV GFGI +A ADGV+VGSA+V L +A + E F L+ AL Sbjct: 145 EVGLALIALASPTTSEQRLDMLCSTAQGYLYYVSFAGVTGASNLLDTHAASDRLRQLRQRAGAPVVAGFGIKDAASAAAMA-VDADGVVVGSALVAALADAGEVRSARERAEAFLAPLRQAL 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOPA (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 K L+ + TPTT R+ A++ + GFVY VS G+TG+ ++ + V ++ IK + PV VGFGI P+ Q +A A+G +VGSA++ L + + E Sbjct: 146 KAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASADASAVGAAVQRIKRHTNLPVCVGFGIRTPDAAQAIAA-QANGAVVGSALIDALKASLNAE 248
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_POLSQ (Tryptophan synthase alpha chain OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 38/115 (33.04%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + PT+ +R+K + + G++Y VS GVTGA + V +++ +I+E + P+AVGFGI+ + V+ AD V++GS +++LL +A P + ++ LE F + ++ AL Sbjct: 151 IFLLAPTSSHERIKEAAKIASGYIYYVSMRGVTGASHLNTQDVASIIPKIREETDIPIAVGFGINDAASAKAVS-VSADAVVIGSRIIRLLEDA-PPGQAVQSLETFIREIRDAL 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GLUOX (Tryptophan synthase alpha chain OS=Gluconobacter oxydans GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEG----------LKELEKFAKSLKS 400 L ++ PTT R+ ++ + GFVY VS G+TG ++ + ++ L I+E+++ PVA+GFGIS PE + + G D +V SA++K + A + E G LK+LE A ++++ Sbjct: 148 LDIISLVAPTTSNSRLFHVLREASGFVYYVSITGITGTNSASAADLEKALPRIREATSLPVAIGFGISTPEQARTASRIG-DAAVVASALIKTM--ASTLENGQATERTVPAVLKQLEGLAAAVRA 270
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CALS8 (Tryptophan synthase alpha chain OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 92 DRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 +R K I + S+GFVY V+ GVTG + I + LL E+K+ ++ P+AVGFGI E V ++ ADG+++GSA++ + +EG ++L F ++++S L Sbjct: 156 ERAKMIAKTSKGFVYCVTRKGVTGFKGEIDKSIYELLSELKKVTSTPLAVGFGIKSKEDVLKLKE-VADGIVIGSAIINKI------DEGKEDLVSFLETIRSVL 253
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_XANOP (Tryptophan synthase alpha chain OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQT-LLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 ++ L+L+ +PTT R+ + ++G++Y VS GVTGA + + + LR++++ + PV GFGI +A ADGV+VGSA+V L EA + E F L+ AL Sbjct: 145 EVGLALIALASPTTSEQRLDMLCSTAQGYLYYVSFAGVTGASNLLDTYAASDRLRQLRQRAGAPVVAGFGIKDAASAAAMA-VDADGVVVGSALVAALAEADDVRSARERAEAFLAPLRQAL 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_XANAC (Tryptophan synthase alpha chain OS=Xanthomonas axonopodis pv. citri GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQT-LLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 ++ L+L+ +PTT R+ + ++G++Y VS GVTGA + H + LR+++ + PV GFGI +A ADGV+VGSA+V L E + E F L+ AL Sbjct: 145 EVGLALIALASPTTSEQRLDMLCSTAQGYLYYVSFAGVTGASNLLDTHAASDRLRQLRRRAGAPVVAGFGIKDAASAAAMA-VDADGVVVGSALVAALAEVNDVRSARERAEAFLAPLRQAL 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SHEON (Tryptophan synthase alpha chain OS=Shewanella oneidensis GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 38/115 (33.04%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE-EGLKELEKFAKSLKSA 403 + P +D + + ++ EG+ YL+S GVTGA V+ +L +++E + P +GFGI++P V GA G I GSA+VK++ Q E + L L +F +++K+A Sbjct: 163 IFIAPPNADSDTLAKVSQSGEGYTYLLSRAGVTGADTKAGTPVEEILAKLQEFNAPPPLLGFGIAEPAQVSAAIKAGAAGAISGSAVVKIIETHQQDEVKLLAALGEFTRTMKAA 277
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOPT (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 334 K L+ + TPTT R+ A++ + GFVY VS G+TG+ ++ + V ++ IK + PV VGFGI P+ Q +A A+G +VGSA++ L Sbjct: 146 KAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASADASAVGAAVQRIKRHTNLPVCVGFGIRTPDAAQAIAA-QANGAVVGSALIDAL 241 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |