BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_KLEAE (Tryptophan synthase alpha chain OS=Klebsiella aerogenes GN=trpA PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++ E P GFGIS PE V GA G I GSA+VK++ P+ L EL+ F +SLK+A Sbjct: 139 FRQAAMRHNIAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLHHLVEKLAEYHAAPPLQGFGISAPEQVSAAIDAGAAGAISGSAIVKIIERHLDEPQTMLDELKAFVQSLKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HAEIE (Tryptophan synthase alpha chain OS=Haemophilus influenzae (strain PittEE) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASI-SGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 V P ++ + + SEG+ YLVS GVT A + ++ TL+ ++K + P+ GFGI++P V++ GA G I GSA VK++ + E+ L EL +F +++K+A Sbjct: 151 VFICPPNADEKTIQGVAKNSEGYTYLVSRAGVTSAENQAHAANLDTLVEQLKAHNAPPILQGFGIAQPAQVKEALALGAAGAISGSATVKIIERNLDNHEQCLAELAEFVQTMKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CAUSK (Tryptophan synthase alpha chain OS=Caulobacter sp. (strain K31) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKE-----LEKFAKSLKSA 403 ++L+ PTT R+ +V + GFVY VS GVTG +++ + V + ++++S PVAVGFGI P VA AD +VGSA+V + A E + E + AK+++SA Sbjct: 150 IALIRLAAPTTDDKRLPMVVRRTSGFVYYVSVAGVTGVKSADAADVAPAVARLRKASGLPVAVGFGIRTPAQAAAVAR-VADAAVVGSALVDEIEAAAQLNENVTEKVLLKASELAKAVRSA 270
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SILPO (Tryptophan synthase alpha chain OS=Silicibacter pomeroyi GN=trpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L+ + TPTT R+ +++ + GFVY VS G+TG+ + + V + IK ++ PV VGFGI+ PE + +A ADG +VGSA+V +G + E L ++ + SA Sbjct: 148 LNFIRLATPTTDDKRLPRVLQNTSGFVYYVSITGITGSAEAEATDVGPEVARIKAATDLPVIVGFGINTPEKSRAIAS-VADGAVVGSAIVGQIGAGKPVAEVLAFVKTLSDGAHSA 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_LEPBL (Tryptophan synthase alpha chain OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=trpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12 Identity = 35/120 (29.17%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 50 RLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEE-GLKELEKFAKSLKSAL 406 ++ + TP T DR++++ + GF+Y V+S GVTG R +++ ++ ++ ++ PV GFGIS + ++++ + A+GVI+GSA+ K++ E+ S E + +L +A +++++ Sbjct: 145 KIDFIHLVTPATTIDRIQSMKSFASGFIYYVTSYGVTGERRALAVGLKERIQMVRNKVGLPVCAGFGISTADQAKEISTY-ANGVIIGSAVQKIIEESGSNREVCISKLFTYASEIRASM 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_LEPBJ (Tryptophan synthase alpha chain OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=trpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12 Identity = 35/120 (29.17%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 50 RLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEE-GLKELEKFAKSLKSAL 406 ++ + TP T DR++++ + GF+Y V+S GVTG R +++ ++ ++ ++ PV GFGIS + ++++ + A+GVI+GSA+ K++ E+ S E + +L +A +++++ Sbjct: 145 KIDFIHLVTPATTIDRIQSMKSFASGFIYYVTSYGVTGERRALAVGLKERIQMVRNKVGLPVCAGFGISTADQAKEISTY-ANGVIIGSAVQKIIEESGSNREVCISKLFTYASEIRASM 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CITK8 (Tryptophan synthase alpha chain OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=trpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12 Identity = 41/127 (32.28%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ +++E + P GFGIS PE V GA G I GSA+VKL+ + +P + L EL+ F ++K+A Sbjct: 139 FRQAALRYNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLHHLVEKLQEYNAAPPLQGFGISSPEQVTGAIEAGAAGAISGSAIVKLIEKNVANPGQMLTELKAFVTAMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BURTA (Tryptophan synthase alpha chain OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=trpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12 Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + PT+ DR+ A+ E + G+VY VS GVTGA ++ + IK PV VGFGI + VA AD V++GS +V+LL +A +PE EL++F L++A+ Sbjct: 151 IFLLAPTSTDDRIAAVGEVASGYVYYVSLKGVTGAANLDVSTIEGKIPAIKSRVPLPVGVGFGIRDAATARAVAE-VADAVVIGSRLVQLLEQA-APENAAAELKEFVAGLRAAI 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SHIDS (Tryptophan synthase alpha chain OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=trpA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKAFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECOUT (Tryptophan synthase alpha chain OS=Escherichia coli (strain UTI89 / UPEC) GN=trpA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKAFVQPMKAA 265 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |