BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CHLSY (Tryptophan synthase alpha chain OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.262e-18 Identity = 48/119 (40.34%), Postives = 76/119 (63.87%), Query Frame = 2 Query: 50 RLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 +L L++F PTTP R+ I + GF+Y+VS GVTGAR +++G++ L+ +++ + P+ VGFGIS+P H+ +VA ADG IVGSA++ L E PE+ + + + L SA+ Sbjct: 147 QLDLIMFIAPTTPPARISQITAQASGFLYIVSLTGVTGARQTLAGNLTDLIANVRQQTNLPLVVGFGISQPAHIAEVARI-ADGAIVGSALIDRL-ERLPPEDRVSGAAAYIRELLSAV 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CHLAA (Tryptophan synthase alpha chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.262e-18 Identity = 48/119 (40.34%), Postives = 76/119 (63.87%), Query Frame = 2 Query: 50 RLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 +L L++F PTTP R+ I + GF+Y+VS GVTGAR +++G++ L+ +++ + P+ VGFGIS+P H+ +VA ADG IVGSA++ L E PE+ + + + L SA+ Sbjct: 147 QLDLIMFIAPTTPPARISQITAQASGFLYIVSLTGVTGARQTLAGNLTDLIANVRQQTNLPLVVGFGISQPAHIAEVARI-ADGAIVGSALIDRL-ERLPPEDRVSGAAAYIRELLSAV 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METM6 (Tryptophan synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=trpA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.648e-18 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 YR K + V P TP DR+K EAS F+YL+S+ G+TGAR S ++ + + + VGFGISK H + + GADGVIVGSA V ++ EE L +LE+ AK L + Sbjct: 124 YREICKKHEMGTVFLAAPNTPEDRLKTSDEASTEFLYLISTFGITGARESFEQMTFDFIKRARTTCKGKICVGFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSEEALVKLEELAKELSEGI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METAC (Tryptophan synthase alpha chain OS=Methanosarcina acetivorans GN=trpA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.648e-18 Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K L L+ PTT R++ I+E GF+YLVS +GVTGARA +SG + LL +K + P AVGFGIS + +V GAD VIVGS V+++ E E +LE A+ LKS + Sbjct: 153 KYGLDLIFLVAPTTTDARIRKILERGSGFIYLVSRLGVTGARADVSGSTKELLSRVK--TDIPKAVGFGISTGKQAAEVRKAGADAVIVGSVFVRIIEEGNGVNE---KLEALARELKSGI 268
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PYRAB (Tryptophan synthase alpha chain OS=Pyrococcus abyssi GN=trpA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.811e-18 Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKE 370 + V P TP +R+K I +AS GFVYL+S G TGAR I LL+ K VAVGFG+SK EHV+ + GA+GV+VGSA++ ++ E ++ EE L+E Sbjct: 134 IKTVFLAAPNTPDERLKEIDKASTGFVYLISLYGTTGARDKIPETAFNLLKRAKRICKNKVAVGFGVSKREHVEMLLNAGANGVVVGSALINIIAEHGENAEEKLRE 240
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METKA (Tryptophan synthase alpha chain OS=Methanopyrus kandleri GN=trpA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.811e-18 Identity = 46/116 (39.66%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 47 IRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 + + ++ P+T +R+K I E + GFVY++S GVTGAR +S L+R +++ PVAVGFGIS+ HV++V GADG IVGSA +K + ++ E + + + AK L Sbjct: 145 LEIDVIYLVAPSTTDERLKKIGERASGFVYVISRYGVTGARRDLSEDTLELVRWVRDHVDVPVAVGFGISERWHVEEVIAAGADGAIVGSAFIKEIHRSEDIAEAEERVRELAKEL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOSL (Tryptophan synthase alpha chain OS=Geobacter sulfurreducens GN=trpA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.811e-18 Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L ++ TPT+ R++ + + GFVY VS GVTGAR+ + V + + I+E+ T PV VGFGIS P+ QVA ADGV+VGSA+VKL + E G +E+ F +L+ A+ Sbjct: 147 LDVIFLLTPTSDEGRIRKVARQARGFVYYVSVTGVTGARSGVEASVSSNVAAIREAITVPVVVGFGISTPDQAAQVAA-SADGVVVGSAIVKLFERFTAAELG-REVATFVSALREAI 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METM5 (Tryptophan synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=trpA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.672e-18 Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 YR K + V P TP +R+K EAS F+YL+S+ G+TGAR + ++ + + + VGFGISK H + + GADGVIVGSA V ++ EE L +LE+FAK L + Sbjct: 124 YREICKKHEMGTVFLAAPNTPEERLKISDEASTEFLYLISTFGITGARDTFEQMTFDFIKRARTTCKGKICVGFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSEEALVKLEEFAKELSEGI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CHLAD (Tryptophan synthase alpha chain OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.672e-18 Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L L++F PTTP R+ IV + GF+Y+VS GVTGAR +++ ++ L+ +++ + P+ VGFGIS+P HV +VA ADG IVGSA++ L E +P E + + + L SA Sbjct: 148 LDLIMFIAPTTPPTRITQIVAHASGFLYIVSLTGVTGARQTLAANLADLITTVRQQTDLPLVVGFGISQPSHVAEVARL-ADGAIVGSALIDRL-ERLAPSERVSGATAYIRELVSA 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEMY (Tryptophan synthase alpha chain OS=Pseudomonas mendocina (strain ymp) GN=trpA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.796e-18 Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGL 364 L + TTPTT DR+ ++ S GFVY VS GVTGA A+ HV+ + ++ + PV +GFGI PEH +VA A+G +VGSA++ + EA+SP++ + Sbjct: 148 LDFIRLTTPTTDDDRLPTVLAGSSGFVYYVSVAGVTGAGAATLDHVEEAVARLRRHTDLPVCIGFGIRTPEHAAEVAK-RAEGAVVGSALIDKIAEAKSPQQAI 250 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |