BQ623351

Overview
NameBQ623351
Unique NameBQ623351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10453 contig Csv1_Contig10453:309..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1
Query:  400 HYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKP 606
            HYRGVR RPWGK+AAEIRDP K G+RVWLGT+DT   AA AYD+AAF +RGSKA LNFP  L  G +KP
Sbjct:  155 HYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFP--LEVGKWKP 221          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query:  373 RDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGN 597
            +D+   +  HYRGVR RPWGK+AAEIRDPKK  ARVWLGT++T E AALAYD+AA + +GSKAKLNFP  +  G+
Sbjct:   80 QDQGDLRRRHYRGVRQRPWGKWAAEIRDPKK-AARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGS 153          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            YRGVR RPWGKYAAEIRD  ++GARVWLGT++T E AALAYD+AAF MRG+KA LNFP
Sbjct:   59 YRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 1
Query:  400 HYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            HYRGVR RPWGKYAAEIRDP K G R+WLGTYDT   A  AYD+AAF++RG KA LNFP
Sbjct:   87 HYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFP 145          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20
Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = 1
Query:  352 QTAGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRG 594
            +++G      +Q K   YRGVR RPWGKYAAEIRD +K+G RVWLGT+DT E AA AYD+AA+ MRG  A LNFPH    G
Sbjct:    6 RSSGSGGGGAEQGK---YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMG 83          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 1
Query:  400 HYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFK 603
            HYRGVR RPWGK+AAEIRDP + G RVWLGT+DT   AA AYD+AAF++RGSKA +NFP  L   NFK
Sbjct:  144 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFP--LEVANFK 209          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGN 597
            YRGVR RPWGKYAAEIRD +K+G RVWLGT+DT E AA AYD+AA+ MRG  A LNFPH    G+
Sbjct:   15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHEYNMGS 79          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPH 579
            YRGVR RPWGKYAAEIRD  ++GARVWLGT++T E AA AYD+AAF MRG +A LNFPH
Sbjct:   14 YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPH 72          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 1
Query:  400 HYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFK 603
            HYRGVR RPWGK+AAEIRDP + G RVWLGT+DT   AA AYD+AA+++RGSKA +NFP  L   NFK
Sbjct:  137 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFP--LEVANFK 202          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 46/68 (67.65%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  373 RDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            +D+   +  HYRGVR RPWGK+AAEIRDP+K  ARVWLGT++T E AALAYD AA + +GSKAKLNFP
Sbjct:   82 QDQGLLRKRHYRGVRQRPWGKWAAEIRDPQK-AARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFP 148          
The following BLAST results are available for this feature:
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
EF102_ARATH7.008e-2171.01Ethylene-responsive transcription factor 5 OS=Arab... [more]
EF114_ARATH1.195e-2064.00Ethylene-responsive transcription factor ERF114 OS... [more]
PTI5_SOLLC2.663e-2077.59Pathogenesis-related genes transcriptional activat... [more]
EF104_ARATH2.663e-2074.58Ethylene-responsive transcription factor ERF104 OS... [more]
ERF97_ARATH3.478e-2059.26Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF5_TOBAC4.543e-2069.12Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF96_ARATH5.933e-2069.23Ethylene-responsive transcription factor ERF096 OS... [more]
ERF95_ARATH1.012e-1974.58Ethylene-responsive transcription factor ERF095 OS... [more]
ERF5_NICSY1.012e-1967.65Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF115_ARATH1.012e-1967.65Ethylene-responsive transcription factor ERF115 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00442 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00442 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623351 ID=BQ623351; Name=BQ623351; organism=Citrus sinensis; type=EST; length=706bp
TTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAA
CACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGT
ACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAA
GTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCAATCCCTTC
CTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCG
TGGGTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCA
ATAAGCGAAGCCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCA
CCAGACGGCGGGGTTGGCAGCACGTGATCGTGATCAGGCGAAGGTGGTGC
ATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGGCTGAGATT
AGAGACCCTAAGAAGAACGGGGCACGTGTTTGGCTTGGCACTTATGATAC
CCCTGAGGGCGCAGCCTTGGCTTATGATAAAGCCGCGTTCGAGATGCGTG
GCTCTAAAGCTAAGCTTAATTTTCCTCACTTACTTGGCAGGGGTAATTTT
AAGCCCGGTCGTGTCACACCACCAACACCACTAAGCGTGGCTCACCAGAG
TCCGAGCCTGAGCTTTCTCCTACTTCTTCATCTTCTTCCTCTTCTTCGGC
TACTTC
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