BQ623351

Overview
NameBQ623351
Unique NameBQ623351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10453 contig Csv1_Contig10453:309..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKP 606
            YRGVR R WGK+ AEIR P+ N  R+WLGT+DT E AALAYDKAA+++RG  A+LNFP L     ++P
Sbjct:   83 YRGVRQRHWGKWVAEIRLPR-NRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQP 149          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLL 585
            YRGVR R WGK+ AEIR PK N  R+WLGT++T E AALAYD+AAF++RG  AKLNFP+L+
Sbjct:   71 YRGVRQRHWGKWVAEIRLPK-NRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLI 130          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  367 AARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPH 579
            +A D  + +   Y+G+R RPWG++AAEIRDP K G RVWLGT++T E AA AYD  A  +RG+KAKLNFP+
Sbjct:   13 SASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIK-GVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPN 82          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF61_ARATH (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 1
Query:  358 AGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHL 582
            A   A  R   K   YRGVR R WGK+ AEIR P+ N  RVWLGTYDT E AA AYD+AA+++RG  A+LNFP+L
Sbjct:  121 AAALAAGRVTKKKKLYRGVRQRHWGKWVAEIRLPQ-NRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNL 194          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 39/67 (58.21%), Postives = 53/67 (79.10%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFK 603
            YRGVR R WGK+ AEIR PK N  R+WLGT++T + AALAYD+AA ++RG  A+LNFP ++ +G++K
Sbjct:  111 YRGVRQRQWGKWVAEIRLPK-NRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVRQGHYK 176          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTPLSVA 642
            YRGVR R WGK+ AEIR P+ N  R+WLGT+DT E AALAYD+AAF++RG  A+LNFP L  +    P       P+  A
Sbjct:  143 YRGVRQRHWGKWVAEIRLPR-NRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPALRYQTGSSPSDTGEYGPIQAA 221          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            +RGVR RPWGK+AAEIRDP +   RVWLGT+DT E AA+ YD AA ++RG  A+LNFP
Sbjct:   87 FRGVRQRPWGKWAAEIRDPSRR-VRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 1
Query:  388 AKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            +K + +RGVR RPWG++AAEIRDP K   RVWLGT+D+ E AA AYD AA  +RG KAK NFP
Sbjct:   23 SKEIRFRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFP 84          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHL 582
            YRGVR R WGK+ AEIR P+ N  R+WLGT+DT E AA+AYD+ AF++RG  A+LNFP L
Sbjct:  187 YRGVRQRHWGKWVAEIRKPR-NRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPEL 245          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query:  361 GLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLL 585
            G   RDR       Y+G+R R WGK+ AEIR+P K  +R+WLG+Y TPE AA AYD A F +RG  A+LNFP LL
Sbjct:   13 GTRKRDRP------YKGIRMRKWGKWVAEIREPNKR-SRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELL 80          
The following BLAST results are available for this feature:
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ERF58_ARATH3.047e-1660.29Ethylene-responsive transcription factor ERF058 OS... [more]
ERF56_ARATH3.047e-1667.21Ethylene-responsive transcription factor ERF056 OS... [more]
ERF73_ARATH5.198e-1657.75Ethylene-responsive transcription factor ERF073 OS... [more]
ERF61_ARATH5.198e-1658.67Ethylene-responsive transcription factor ERF061 OS... [more]
ERF57_ARATH5.198e-1658.21Ethylene-responsive transcription factor ERF057 OS... [more]
ERF55_ARATH5.198e-1653.75Ethylene-responsive transcription factor ERF055 OS... [more]
CRF1_ARATH6.788e-1665.52Ethylene-responsive transcription factor CRF1 OS=A... [more]
ERF3_TOBAC8.866e-1663.49Ethylene-responsive transcription factor 3 OS=Nico... [more]
ERF53_ARATH1.975e-1563.33Ethylene-responsive transcription factor ERF053 OS... [more]
ERF10_ARATH2.580e-1554.67Ethylene-responsive transcription factor ERF010 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00442 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00442 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623351 ID=BQ623351; Name=BQ623351; organism=Citrus sinensis; type=EST; length=706bp
TTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAA
CACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGT
ACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAA
GTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCAATCCCTTC
CTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCG
TGGGTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCA
ATAAGCGAAGCCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCA
CCAGACGGCGGGGTTGGCAGCACGTGATCGTGATCAGGCGAAGGTGGTGC
ATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGGCTGAGATT
AGAGACCCTAAGAAGAACGGGGCACGTGTTTGGCTTGGCACTTATGATAC
CCCTGAGGGCGCAGCCTTGGCTTATGATAAAGCCGCGTTCGAGATGCGTG
GCTCTAAAGCTAAGCTTAATTTTCCTCACTTACTTGGCAGGGGTAATTTT
AAGCCCGGTCGTGTCACACCACCAACACCACTAAGCGTGGCTCACCAGAG
TCCGAGCCTGAGCTTTCTCCTACTTCTTCATCTTCTTCCTCTTCTTCGGC
TACTTC
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