BQ623352
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 393.66 bits (1010), Expect = 1.362e-116 Identity = 172/198 (86.87%), Postives = 186/198 (93.94%), Query Frame = 2 Query: 5 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI+++LD+ T+ LRF +PFP+LAYPFYLWSRSPGK GSHF P+S LFVP ERKD+ITST CWTAMAALLV L+F MGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGK WSYLRGGLTTLDRDYGW+NNIHHDIGTHVIHHLF Sbjct: 189 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLF 386 HSP 2 Score: 47.3654 bits (111), Expect = 1.362e-116 Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGNITVSQRNRGP 690 PQIPHYHL+EATEAAKPV+G + GP Sbjct: 387 PQIPHYHLVEATEAAKPVMGKYYREPKKSGP 417
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 393.66 bits (1010), Expect = 3.027e-116 Identity = 176/198 (88.89%), Postives = 188/198 (94.95%), Query Frame = 2 Query: 5 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 KLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY+ LD+AT+ LRF +PFPLLAYP YLWSRSPGK GSHF P+SDLFVP+E+KDVITSTVCWTAM ALLVGLSFV+GP+QLLKLYG+PY VMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGW+NNIHHDIGTHVIHHLF Sbjct: 179 KLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTVCWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLF 376 HSP 2 Score: 46.2098 bits (108), Expect = 3.027e-116 Identity = 21/31 (67.74%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGNITVSQRNRGP 690 PQIPHYHLIEATEAAKPVLG + P Sbjct: 377 PQIPHYHLIEATEAAKPVLGKYYREPKKSAP 407
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 1.494e-115 Identity = 166/198 (83.84%), Postives = 183/198 (92.42%), Query Frame = 2 Query: 5 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 +LNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL E IY+ L+ T+ RF +PFP+LAYPFYLW+RSPGK GSH+ P+SDLF+P E+KDV+TST CWTAMAALLV L+FVMGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGW+NNIHHDIGTHVIHHLF Sbjct: 168 RLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLF 365 HSP 2 Score: 50.447 bits (119), Expect = 1.494e-115 Identity = 22/31 (70.97%), Postives = 24/31 (77.42%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGNITVSQRNRGP 690 PQIPHYHL+EATEAAKPVLG +N GP Sbjct: 366 PQIPHYHLVEATEAAKPVLGKYYREPKNSGP 396
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 3.331e-114 Identity = 172/198 (86.87%), Postives = 185/198 (93.43%), Query Frame = 2 Query: 5 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 KLNSVVGHLLHSSILVPYHGWRISHRTHHQ+HGH ENDESWHPL EK++R+LD+ TR LRF PFPLLA+P YL+SRSPGK+GSHFDP+SDLFVP+ERKDVITST CW AM LLVGL FVMGP+QLLKLYG+PY IFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGW+NNIHHDIGTHVIHHLF Sbjct: 183 KLNSVVGHLLHSSILVPYHGWRISHRTHHQHHGHAENDESWHPLPEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITSTACWAAMLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLF 380 HSP 2 Score: 43.8986 bits (102), Expect = 3.331e-114 Identity = 18/20 (90.00%), Postives = 19/20 (95.00%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLG 657 PQIPHYHL+EATEAAKPV G Sbjct: 381 PQIPHYHLVEATEAAKPVFG 400 HSP 3 Score: 23.8682 bits (50), Expect = 3.331e-114 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 657 KYYREPKKS 683 KYYREPKKS Sbjct: 401 KYYREPKKS 409
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 3.988e-113 Identity = 168/198 (84.85%), Postives = 182/198 (91.92%), Query Frame = 2 Query: 5 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+SEKIY TLD TRF RF +P +LAYPFYLW+RSPGK GSH+ P+SDLF+P ERKDV+TST CWTAMAALLV L+F +GP+Q+LKLYG+PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG +NNIHHDIGTHVIHHLF Sbjct: 175 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLF 372 HSP 2 Score: 46.595 bits (109), Expect = 3.988e-113 Identity = 21/31 (67.74%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGNITVSQRNRGP 690 PQIPHYHL+EATEAAKPVLG GP Sbjct: 373 PQIPHYHLVEATEAAKPVLGKYYREPDKSGP 403
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 7.446e-112 Identity = 166/198 (83.84%), Postives = 181/198 (91.41%), Query Frame = 2 Query: 5 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 +LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+SEKIY++LD TRF RF +P +LAYPFYLW+RSPGK GSH+ P+SDLF+P ER DV+TST CWTAMA LLV L+FVMGPMQ+LKLY +PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG +NNIHHDIGTHVIHHLF Sbjct: 133 RLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLF 330 HSP 2 Score: 46.595 bits (109), Expect = 7.446e-112 Identity = 21/31 (67.74%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGNITVSQRNRGP 690 PQIPHYHL+EATEAAKPVLG GP Sbjct: 331 PQIPHYHLVEATEAAKPVLGKYYREPDKSGP 361
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 3.438e-103 Identity = 151/197 (76.65%), Postives = 171/197 (86.80%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 LNS+VGH+LHSSILVPYHGWRISHRTHHQNHGH+E DESW PL+EKIY+ LDS TR +RF +PFPL YP YL+SRSPGK GSHF+P S+LF PSERK + ST+CW M +LL+ LSF+ P+ +LKLYG+PYWIFVMWLD VTYLHHHGH KLPWYRGKEWSYLRGGLTT+DRDYGW+ NIHHDIGTHVIHHLF Sbjct: 113 LNSLVGHILHSSILVPYHGWRISHRTHHQNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLF 309 HSP 2 Score: 44.669 bits (104), Expect = 3.438e-103 Identity = 18/21 (85.71%), Postives = 21/21 (100.00%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGN 660 PQIPHYHL+EAT+AAKPVLG+ Sbjct: 310 PQIPHYHLVEATQAAKPVLGD 330
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 2.905e-99 Identity = 146/198 (73.74%), Postives = 171/198 (86.36%), Query Frame = 2 Query: 5 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 KLNS VGH+LHS ILVPY+GWRISHRTHHQNHGHVE DESW PL+EK+Y+ LD TR LR+ PFP+ AYPFYLW+RSPGK GSHF+P S+LF P ERK V+TST+CW + ++L+ LS +GP+ +LKLYG+PY IFVMWLD VTYLHHHG+ KLPWYRG+EWSYLRGGLTT+DRDYGW+NN+HHDIGTHVIHHLF Sbjct: 109 KLNSFVGHILHSLILVPYNGWRISHRTHHQNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVVTSTLCWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLDFVTYLHHHGYTHKLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLF 306 HSP 2 Score: 41.9726 bits (97), Expect = 2.905e-99 Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGNITVSQRNRGP 690 PQIPHYHL+EAT++AK VLG + GP Sbjct: 307 PQIPHYHLVEATKSAKSVLGKYYREPQKSGP 337
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 1.958e-98 Identity = 150/197 (76.14%), Postives = 169/197 (85.79%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 LNSVVGH+LHS ILVPYHGWRISHRTHHQNHGHVENDESW PL EK+Y+ L +TR LR+ +P P+LAYP YLW RSPGK GSHF+P S LF PSERK + TST CW+ M A LV LSF++ P+ +LK+YG+PY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLRGGLTT+DRDYG NNIHHDIGTHVIHHLF Sbjct: 111 LNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLF 307 HSP 2 Score: 38.891 bits (89), Expect = 1.958e-98 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLG 657 PQIPHYHL++AT AAK VLG Sbjct: 308 PQIPHYHLVDATRAAKHVLG 327 HSP 3 Score: 22.7126 bits (47), Expect = 1.958e-98 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 657 KYYREPKKSG 686 +YYREPK SG Sbjct: 328 RYYREPKTSG 337
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 2.439e-98 Identity = 149/197 (75.63%), Postives = 169/197 (85.79%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 LN+VVGH+LHS+ILVPYHGWRISH+THHQNHG+VE DESW P+ EK+Y + +T+FLR+KIPFPLLAYP YL RSPGKSGSHF+P SDLF P ERK V+TST+CWT MAALL+ L G +Q+ K+YG PY IFVMWLD VTYLHHHG+E KLPWYRGKEWSYLRGGLTT+DRDYG NNIHHDIGTHVIHHLF Sbjct: 110 LNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPGKSGSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLF 306 HSP 2 Score: 44.2838 bits (103), Expect = 2.439e-98 Identity = 20/31 (64.52%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLGNITVSQRNRGP 690 PQIPHYHL EAT+AAKPVLG + GP Sbjct: 307 PQIPHYHLREATKAAKPVLGKYYREPKKSGP 337 The following BLAST results are available for this feature:
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623352 ID=BQ623352; Name=BQ623352; organism=Citrus sinensis; type=EST; length=692bpback to top |