BQ623352
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 2.123e-97 Identity = 148/197 (75.13%), Postives = 167/197 (84.77%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDIGTHVIHHLF 598 LNSVVGH+LHS ILVPYHGWRISHRTHHQNHGHVENDESW PL E++Y+ L +TR LR+ +P P+LAYP YL RSPGK GSHF+P S LF PSERK + TST CW+ M L+ LSFV GP+ +LK+YG+PY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLRGGLTT+DRDYG NNIHHDIGTHVIHHLF Sbjct: 114 LNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLF 310 HSP 2 Score: 39.2762 bits (90), Expect = 2.123e-97 Identity = 16/20 (80.00%), Postives = 19/20 (95.00%), Query Frame = 1 Query: 598 PQIPHYHLIEATEAAKPVLG 657 PQIPHYHL++AT+AAK VLG Sbjct: 311 PQIPHYHLVDATKAAKHVLG 330 HSP 3 Score: 22.7126 bits (47), Expect = 2.123e-97 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 657 KYYREPKKSG 686 +YYREPK SG Sbjct: 331 RYYREPKTSG 340
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 5.248e-33 Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEK----IYRTLDSAT-RFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVM---GPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDI-GTHVIHHLF 598 ++ VG +LHS ++ PY W+ SHR HH N ++NDE + P S+ Y+ L+ R L I F L +P YL++ GK +HFDP S +F ER V+ S + + A+L G+ + G + +YG+P ++ D++TYLHH LP Y EW++LRG L+T+DRD+G++N++ HD+ THV+HHLF Sbjct: 111 VDDTVGFILHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITF-TLGFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDL---GLLAVLYGVKLAVAAKGAAWVTCIYGIPVLGVFIFFDIITYLHH--THLSLPHYDSSEWNWLRGALSTIDRDFGFLNSVLHDVTHTHVMHHLF 314 HSP 2 Score: 26.5646 bits (57), Expect = 5.248e-33 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 604 IPHYHLIEATEAAKPVLGN 660 IPHYH EA +A VLG+ Sbjct: 317 IPHYHAKEARDAINTVLGD 335
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.087e-31 Identity = 74/207 (35.75%), Postives = 104/207 (50.24%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTL-----DSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDI-GTHVIHHLF 598 L+ VG + HS +LVPY W+ SHR HH N G +E DE + P + + + R + + F +L +P YL G+ HF PN+ ++ ER + S A+ L + G ++ LYG+P I +L L+TYL H LP Y EW +LRG L T+DRDYG +N + H+I THV HHLF Sbjct: 118 LDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 321 HSP 2 Score: 30.8018 bits (68), Expect = 6.087e-31 Identity = 11/19 (57.89%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 604 IPHYHLIEATEAAKPVLGN 660 +PHY+ +EAT+A KP+LG+ Sbjct: 324 MPHYNAMEATKAIKPILGD 342
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.032e-30 Identity = 72/207 (34.78%), Postives = 105/207 (50.72%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTL-----DSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDI-GTHVIHHLF 598 L+ +VG +LHS++LVPY W+ SHR HH N G +E DE + P + + + R L + L +P YL G+ H+DP ++ ER + S A+ L L+ G ++ +YG+P + +L L+T+L H LP Y EW +LRG L T+DRDYG +N + H+I THV HHLF Sbjct: 118 LDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTL-TLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQH--THPALPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 321 HSP 2 Score: 33.113 bits (74), Expect = 1.032e-30 Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 1 Query: 604 IPHYHLIEATEAAKPVLG 657 +PHYH +EAT+A KP+LG Sbjct: 324 MPHYHAMEATKAIKPILG 341
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.864e-30 Identity = 76/216 (35.19%), Postives = 105/216 (48.61%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP------------LSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRS------PGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNIHHDI-GTHVIHHLF 598 L+ VG + HS +LVPY W+ SHR HH N G +E DE + P L+ + RT+ +F L +P Y W+ + P HF PN+ ++ ER + S A+ L + G ++ LYG+P I +L L+TYL H LP Y EW +LRG L T+DRDYG +N + H+I THV HHLF Sbjct: 118 LDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQF--------TLGWPLY-WAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 322 HSP 2 Score: 31.9574 bits (71), Expect = 3.864e-30 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 604 IPHYHLIEATEAAKPVLGN 660 +PHYH +E T+A KP+LG+ Sbjct: 325 MPHYHAMEVTKAIKPILGD 343
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.110e-29 Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP--------LSEKIYRTLDSATRFL-RFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWVNNI-HHDIGTHVIHHLF 598 ++ VVG LHS++LVPY W+ISHR HH N G ++ DE + P S+ + L A L I +P+ F + R SH+ P + ++ ER + S V ++ L ++ + G + LL +YG+P I +L +TYL H LP Y EW +L+G L T+DRDYG +N + HH THV HHLF Sbjct: 122 VDDVVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMY-LAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVALFSVTYSLYRVATLKGLVWLLCVYGVPLLIVNGFLVTITYLQH--THFALPHYDSSEWDWLKGALATMDRDYGILNKVFHHITDTHVAHHLF 325 HSP 2 Score: 32.7278 bits (73), Expect = 1.110e-29 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 604 IPHYHLIEATEAAKPVLG 657 +PHYH +EAT A KP+LG Sbjct: 328 MPHYHAMEATNAIKPILG 345
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.690e-26 Identity = 73/223 (32.74%), Postives = 110/223 (49.33%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEK--------------------IYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG-WVNNIHHDI-GTHVIHHLF 598 LN+ VG +LHS +LVPYH WRISH HH+ GH+ D+ + P + ++ ++ L + + L +P YL + G+ SHF S +F P D+I S + A L+ S + + + K Y +PY WL L+T+L H + KLP YR W++ RG L T+DR +G +++++ H I THV HHLF Sbjct: 125 LNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKESAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIIPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLF 345 HSP 2 Score: 23.0978 bits (48), Expect = 6.690e-26 Identity = 11/23 (47.83%), Postives = 13/23 (56.52%), Query Frame = 1 Query: 601 QIPHYHLIEATEAAKPVLGNITV 669 Q+P YH EAT K +LG V Sbjct: 347 QMPFYHAEEATYHLKKLLGEYYV 369
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 8.707e-26 Identity = 73/223 (32.74%), Postives = 110/223 (49.33%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEK--------------------IYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG-WVNNIHHDI-GTHVIHHLF 598 LN+ VG +LHS +LVPYH WRISH HH+ GH+ D+ + P + ++ ++ L + + L +P YL + G+ SHF S +F P D+I S + A L+ S + + + K Y +PY WL L+T+L H + KLP YR W++ RG L T+DR +G +++++ H I THV HHLF Sbjct: 125 LNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKENAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIVPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLF 345 HSP 2 Score: 23.0978 bits (48), Expect = 8.707e-26 Identity = 11/23 (47.83%), Postives = 13/23 (56.52%), Query Frame = 1 Query: 601 QIPHYHLIEATEAAKPVLGNITV 669 Q+P YH EAT K +LG V Sbjct: 347 QMPFYHAEEATYHLKKLLGEYYV 369
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: DESA_SYNY3 (Fatty acid desaturase OS=Synechocystis sp. (strain PCC 6803) GN=desA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 51/199 (25.63%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDV-ITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRDY-GWVNNIHHDIGTHVIHHL 595 +N +VGH+ + ++ P+H WR+ H HH + +E D +W P S + ++ + R + + PF+ S HF ++ F +R V ++ V + A L G +K + +P+ ++ W+ T +HH E + + +WS L T+ DY WV + HDI H+ HHL Sbjct: 103 VNDLVGHIAFAPLIYPFHSWRLLHDHHHLHTNKIEVDNAWDPWSVEAFQASPAIVRLF-----YRAIRGPFWWTGSIFHWSLMHFKLSN--FAQRDRNKVKLSIAVVFLFAAIAFPALIITTGVWGFVKFWLMPWLVYHFWMSTFTIVHHTIPE--IRFRPAADWSAAEAQLNGTVHCDYPRWVEVLCHDINVHIPHHL 292
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Match: DESA_SPIPL (Fatty acid desaturase OS=Spirulina platensis GN=desA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 52/199 (26.13%), Postives = 94/199 (47.24%), Query Frame = 2 Query: 8 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAAL-LVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRDYG-WVNNIHHDIGTHVIHHL 595 +N VGH+L I+ P+H WRI H HH+ +E D +W P ++ Y+ +A +F+ ++ + L + + HFD F +R+ V S++ AA+ + +G +K + +P+ +F W+ T LHH + +P+ ++W L+ T+ +Y W + HDI H+ HH+ Sbjct: 102 VNDWVGHILFLPIIYPFHSWRIGHNQHHKYTNRMELDNAWQPWRKEEYQ---NAGKFM--QVTYDLFRGRAWWIGSILHWASIHFDWTK--FEGKQRQQVKFSSLLVIGAAAIAFPTMILTIGVWGFVKFWVIPWLVFHFWMSTFTLLHHTIAD--IPFREPEQWHEAESQLSGTVHCNYSRWGEFLCHDINVHIPHHV 291 The following BLAST results are available for this feature:
BLAST of BQ623352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623352 ID=BQ623352; Name=BQ623352; organism=Citrus sinensis; type=EST; length=692bpback to top |