BQ623358

Overview
NameBQ623358
Unique NameBQ623358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1053 contig Csv1_Contig1053:110..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_PHANO (Nascent polypeptide-associated complex subunit beta OS=Phaeosphaeria nodorum GN=EGD1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34
Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 3
Query:   24 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQED--DDDEVPELV 458
            M+  KL +M  +VR GGKG+ RRK K VHK++ TDDK+LQ+ LK++ V  I AIEEVN+FK D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G       +D  DDD++PELV
Sbjct:    1 MDQAKLARMQASVRIGGKGTPRRKVKKVHKSSGTDDKKLQTALKKLNVQPIQAIEEVNMFKSDGNVIHFSAPKVHASVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKEKGEDGDKKDDDDEDDDDIPELV 148          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_AJECN (Nascent polypeptide-associated complex subunit beta OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.377e-33
Identity = 76/148 (51.35%), Postives = 106/148 (71.62%), Query Frame = 3
Query:   24 MNVEKLMKMAGAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQK-QAPNAGTGAPTTQEDDDDEVPELV 458
            M+  KL ++  +VR G GKG+ RRK K VHK++ TDDK+LQ++LK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q  Q    G  A    +DDDDE+P+LV
Sbjct:    1 MDQAKLARLQQSVRIGKGKGTPRRKTKKVHKSSGTDDKKLQTSLKKLNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKGEGGEDAKKDDDDDDDEIPDLV 148          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_ASPNC (Nascent polypeptide-associated complex subunit beta OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.798e-33
Identity = 74/146 (50.68%), Postives = 106/146 (72.60%), Query Frame = 3
Query:   24 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            M+  KL +M  +VR GGKG+ RRK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N   GA   ++D++D++P+LV
Sbjct:    1 MDQAKLARMQQSVRIGGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFGAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ-AGADGKKDDEEDDIPDLV 145          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_SCLS1 (Nascent polypeptide-associated complex subunit beta OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33
Identity = 76/149 (51.01%), Postives = 105/149 (70.47%), Query Frame = 3
Query:   24 MNVEKLMKMA--GAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            M++EKL +M   G VRTG GKG+ RRK K VHK+T  DDK+LQ++LK++ V  I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G       E+DDD++P+LV
Sbjct:    1 MDMEKLKRMQARGGVRTGDGKGTPRRKVKNVHKSTGMDDKKLQTSLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKAEGGEEKKDDEEDDDDIPDLV 149          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: BTF3_CAEEL (Transcription factor BTF3 homolog OS=Caenorhabditis elegans GN=icd-1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.832e-33
Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 3
Query:   30 VEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            ++KL      VR GGKG+ RRKKK +HKT   DDK+LQS LK++ V  IP IEEVN+ KDD  VI F NPKVQ S+ ANT+ V+G+   K++ ++LPGI+NQLGP++L +L+KLA    K  P+         + +D++VPELV
Sbjct:   10 IKKLQAQQEHVRIGGKGTPRRKKKVIHKTAAADDKKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSADNKQITEMLPGILNQLGPESLTHLKKLANNVTKLGPDG--------KGEDEDVPELV 145          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_BOTFB (Nascent polypeptide-associated complex subunit beta OS=Botryotinia fuckeliana (strain B05.10) GN=egd1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33
Identity = 75/149 (50.34%), Postives = 105/149 (70.47%), Query Frame = 3
Query:   24 MNVEKLMKMA--GAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            M++EKL +M   G VRTG GKG+ RRK K VHK+T  DDK+LQ++LK++ V  I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G       ++DDD++P+LV
Sbjct:    1 MDMEKLKRMQARGGVRTGDGKGTPRRKVKNVHKSTGMDDKKLQTSLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKAEGGEDKKDDDEDDDDIPDLV 149          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_COCIM (Nascent polypeptide-associated complex subunit beta OS=Coccidioides immitis GN=EGD1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.522e-32
Identity = 74/147 (50.34%), Postives = 106/147 (72.11%), Query Frame = 3
Query:   24 MNVEKLMKMAGAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            M+  KL ++  +VR G GKG+ RRK K VHK++ TDDK+LQ++LK++ V  I AIEEVN+FK+D  VI F  PKVQAS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G  A    E+DD+++P+LV
Sbjct:    1 MDQAKLARLQQSVRIGTGKGTPRRKTKKVHKSSGTDDKKLQTSLKKLNVQPIQAIEEVNMFKEDGNVIHFAAPKVQASVPSNTFAIYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKKEGE-AKKEGEEDDEDIPDLV 146          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_ASPTN (Nascent polypeptide-associated complex subunit beta OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.988e-32
Identity = 74/158 (46.84%), Postives = 108/158 (68.35%), Query Frame = 3
Query:   24 MNVEKLMKMAGAVRTG------------GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            M+  KL +M  +VR G            GKG+ RRK K VHK++  DDK+LQ+TLK++ V  IPA+EEVN+FK+D  VI F NP+V AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N   GA   ++D++D++P+LV
Sbjct:    1 MDQAKLARMQASVRIGNPPSGPRANRNRGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIPAVEEVNMFKEDGNVIHFGNPRVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ-AGAEGKKDDEEDDIPDLV 157          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_EMENI (Nascent polypeptide-associated complex subunit beta OS=Emericella nidulans GN=egd1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.198e-31
Identity = 75/158 (47.47%), Postives = 105/158 (66.46%), Query Frame = 3
Query:   24 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNP------------KVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            M+  KL +M  +VR GGKG+ RRK K VHKT+  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  P            KV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N    A   ++DD+D++P+LV
Sbjct:    1 MDQAKLARMQASVRIGGKGTPRRKVKKVHKTSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKEERALTVGCEIKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ---AGEKKDDDEDDIPDLV 155          
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Match: NACB_ASPOR (Nascent polypeptide-associated complex subunit beta OS=Aspergillus oryzae GN=egd1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.198e-31
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 3
Query:   12 PSSKMNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 458
            P+S     +  ++  +++  GKG+ RRK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N   GA   ++DD+D++P+LV
Sbjct:   38 PNSYKPDHESTRLTNSLKNRGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFGAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ-AGAEGKKDDDEDDIPDLV 186          
The following BLAST results are available for this feature:
BLAST of BQ623358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
NACB_PHANO8.071e-3450.68Nascent polypeptide-associated complex subunit bet... [more]
NACB_AJECN1.377e-3351.35Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPNC1.798e-3350.68Nascent polypeptide-associated complex subunit bet... [more]
NACB_SCLS13.067e-3351.01Nascent polypeptide-associated complex subunit bet... [more]
BTF3_CAEEL6.832e-3350.00Transcription factor BTF3 homolog OS=Caenorhabditi... [more]
NACB_BOTFB8.923e-3350.34Nascent polypeptide-associated complex subunit bet... [more]
NACB_COCIM1.522e-3250.34Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPTN1.988e-3246.84Nascent polypeptide-associated complex subunit bet... [more]
NACB_EMENI2.198e-3147.47Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPOR2.198e-3146.67Nascent polypeptide-associated complex subunit bet... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00449 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00449 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623358 ID=BQ623358; Name=BQ623358; organism=Citrus sinensis; type=EST; length=651bp
CACACAAAAACCCTAGCTCCAAGATGAATGTGGAGAAGCTAATGAAGATG
GCCGGTGCAGTTCGCACCGGTGGTAAGGGTAGTGTGAGAAGAAAGAAGAA
GGCTGTTCATAAGACAACAACCACCGATGACAAGAGGCTTCAGAGCACCT
TGAAGAGAATAGGAGTGAATGCTATTCCTGCAATTGAGGAAGTTAACATT
TTCAAGGATGACGTCGTTATTCAGTTCTTAAATCCCAAAGTACAAGCTTC
AATTGCTGCCAACACATGGGTAGTTAGTGGTGCCCCACAAACCAAGAAGT
TGCAGGATATTCTCCCTGGAATTATCAATCAATTGGGGCCAGATAATTTG
GACAACCTGAGGAAGTTGGCGGAGCAGTTTCAGAAGCAAGCACCTAATGC
AGGAACTGGTGCACCCACGACTCAAGAGGACGACGACGATGAGGTCCCAG
AGCTTGTGGCAGGCGAGACGTTTGAAGCTGCCGCAGAGGAGAAAACAGAG
AAACCTGACGCTGCTTCTTAGAGAGTTTTATCTAGAGGGACTTTGGGTAT
TCTATATATTTTCTATGTTTTTTGAGTTTTTATTTTACTTTTCCGAGTCA
ACTTTCTCTTGTTTTATCTGATTCTCCCTGTGACACTAGATATTGGTACT
T
back to top