BQ623360

Overview
NameBQ623360
Unique NameBQ623360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 87/216 (40.28%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            E+V LPLR P LF   K +G  P +G+LLYGPPGTGKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  PAIIFIDE+D+   +R  +  E    + ++ + L DG    Q A V+V+AATNRP+ +D A+ R  R  +  +IG+PD   R +IL++  K  K+ +++D + +A    G  G+DL  +C +AA  +IR+ +D
Sbjct:  218 EMVELPLRHPALF---KAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428          

HSP 2 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 88/223 (39.46%), Postives = 132/223 (59.19%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L ELV  P+  P+ F    +  P KGVL YGPPG GKT+LAKAIA E  A FI+++   L++ WFG+++  V  +F  A +  P ++F DE+DS    R  +  +   A   +  + +   DG +  +N  V ++ ATNRP  +D AILR  RL Q   I +PD K R  ILK  L+   V +++D D+LA +  GF+G+DL E+C++A   +IRE ++
Sbjct:  485 VKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKN--VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 87/223 (39.01%), Postives = 133/223 (59.64%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L ELV  P+  P+ F    +  P KGVL YGPPG GKT+LAKAIA E  A FI+++   L++ WFG+++  V  +F  A +  P ++F DE+DS    R  +  +   A   +  + +   DG ++ +N  V ++ ATNRP  +D AILR  RL Q   I +PD K R  ILK  L+   + +++D D+LA +  GF+G+DL E+C++A   +IRE ++
Sbjct:  485 VKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKN--VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704          

HSP 2 Score: 155.992 bits (393), Expect = 1.602e-37
Identity = 87/216 (40.28%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            E+V LPLR P LF   K +G  P +G+LLYGPPGTGKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  PAIIFIDE+D+   +R  +  E    + ++ + L DG    Q A V+V+AATNRP+ +D A+ R  R  +  +IG+PD   R +IL++  K  K+ +++D + +A    G  G+DL  +C +AA  +IR+ +D
Sbjct:  218 EMVELPLRHPALF---KAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 99/216 (45.83%), Postives = 129/216 (59.72%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTS----DHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVE-ENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRE 647
            E+V LPL+ PELF    ++ P KGVLLYGPPGTGKT+LAKA+A E+ A F+ V  S L+ K+ G+  KLV  VF LA +  P IIFIDE+D+   +R  S    D E    +  + +A  DGF  D    V ++AATNRP  LD AILR  R  +  EI MPD   R  ILK+    EK+  + +D   +A + E   G+DL  VC +A  F+IRE
Sbjct:  162 EVVELPLKNPELFEKVGIV-PPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTL-MQLLAEMDGF--DSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKI--HTEKMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIRE 371          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 86/216 (39.81%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            ELV LPLR P+LF   K +G  P KG+LLYGPPG+GKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  P+IIFIDE+DS   +R  +  E    + ++ + L DG  +   A V+V+ ATNRP+ +D A+ R  R  +  +IG+PD   R ++L++  K  K+ +++D + +A    G+ G+DL  +C +AA   IRE +D
Sbjct:  222 ELVELPLRHPQLF---KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS--RAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432          

HSP 2 Score: 152.525 bits (384), Expect = 1.771e-36
Identity = 86/223 (38.57%), Postives = 130/223 (58.30%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L E V  P+  PE F    +  P KGVL YGPPG GKT+LAKAIA E  A FI+V+   L++ WFG+++  V  +F  A +  P ++F DE+DS   QR +S  +   A   +  + +   DG +  +   V ++ ATNRP  +D A+LR  RL Q   I +PD   R QI K  L+   + +N+D   LA   +GF+G+D+ E+C++A  ++IRE ++
Sbjct:  489 VKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIE 708          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 86/216 (39.81%), Postives = 134/216 (62.04%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            ELV LPLR P+LF   K +G  P KG+LLYGPPG+GKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  P+IIFIDE+DS   +R  ++ E    + ++ + L DG  +   A V+V+ ATNRP+ +D A+ R  R  +  +IG+PD   R ++L++  K  K+ E++D + ++    G+ G+DL  +C +AA   IRE +D
Sbjct:  221 ELVELPLRHPQLF---KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKS--RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMD 431          

HSP 2 Score: 150.214 bits (378), Expect = 8.789e-36
Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L E V  P+  PE F    +  P KGVL YGPPG GKT+LAKAIA E  A FI+V+   L++ WFG+++  V  +F  A +  P ++F DE+DS   QR  S  +   A   +  + +   DG    +   V ++ ATNRP  +D A+LR  RL Q   I +PD   R  I K  L+   V +++D   LA   +GF+G+D+ E+C++A  ++IRE ++
Sbjct:  488 VKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKT--VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIE 707          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 86/216 (39.81%), Postives = 134/216 (62.04%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            ELV LPLR P+LF   K +G  P KG+LLYGPPG+GKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  P+IIFIDE+DS   +R  ++ E    + ++ + L DG  +   A V+V+ ATNRP+ +D A+ R  R  +  +IG+PD   R ++L++  K  K+ E++D + ++    G+ G+DL  +C +AA   IRE +D
Sbjct:  221 ELVELPLRHPQLF---KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKS--RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMD 431          

HSP 2 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 83/224 (37.05%), Postives = 125/224 (55.80%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSD----HEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L E V  P+  PE F    +  P KGVL YGPPG GKT+LAKAIA E  A FI+V+   L++ WFG+++  V  +F  A +  P ++F DE+DS   QR          A   +  + +   DG    +   V ++ ATNRP  +D A+LR  RL Q   I +PD   R  I K  L+   + +++D   LA   +GF+G+D+ E+C++A  ++IRE ++
Sbjct:  488 VKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKT--VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIE 708          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 155.992 bits (393), Expect = 1.602e-37
Identity = 87/216 (40.28%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            E+V LPLR P LF   K +G  P +G+LLYGPPGTGKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  PAIIFIDE+D+   +R  +  E    + ++ + L DG    Q A V+V+AATNRP+ +D A+ R  R  +  +IG+PD   R +IL++  K  K+ +++D + +A    G  G+DL  +C +AA  +IR+ +D
Sbjct:  218 EMVELPLRHPALF---KAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428          

HSP 2 Score: 155.606 bits (392), Expect = 2.092e-37
Identity = 87/223 (39.01%), Postives = 133/223 (59.64%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L +LV  P+  P+ F    +  P KGVL YGPPG GKT+LAKAIA E  A FI+++   L++ WFG+++  V  +F  A +  P ++F DE+DS    R  +  +   A   +  + +   DG +T +N  V ++ ATNRP  +D AILR  RL Q   I +PD K R  ILK  L+   V +++D ++LA +  GF+G+DL E+C++A   +IRE ++
Sbjct:  485 VKRELQDLVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKN--VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.092e-37
Identity = 94/213 (44.13%), Postives = 128/213 (60.09%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQR---RTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            E V LPL+RPELF+   +  P KGVLLYGPPGTGKT+LAKA+A E+ A F+ V  S L+ K+ G+  +LV  +F LA K  P IIFIDE+D+    R    TS    +     + +A  DGF T     V ++ ATNR   LD+A+LR  R  +  EI +PD + R  ILKV  +   +EE ++   +AGL EG  G+DL  +C +A  ++IR
Sbjct:  192 EAVELPLKRPELFTQIGI-EPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFET--RGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIR 401          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 83/216 (38.43%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            E+V LPLR P LF   K +G  P +G+L+YGPPGTGKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  PAIIFIDE+D+   +R  +  E    + ++ + L DG    +++ ++V+AATNRP+ +D A+ R  R  +  +IG+PD   R ++L++  K  K+ +++D + +A    G  G+DL  +C +AA   IRE +D
Sbjct:  215 EMVELPLRHPSLF---KAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGM--KKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMD 425          

HSP 2 Score: 148.288 bits (373), Expect = 3.340e-35
Identity = 85/223 (38.12%), Postives = 129/223 (57.85%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L ELV  P+  P+ F    +  P +GVL YGPPG GKT+LAKAIA E  A FI+V+   L++ WFG+++  V  +F  A    P ++F DE+DS    R  +  +   A   +  + +   DG    +N  V ++ ATNRP  +D AILR  RL Q   I +PD K R  ILK  L+   + + +D  Y+A + +GF+G+DL E+C++A   +IR+ ++
Sbjct:  482 VKKELQELVQYPVEHPDKFLKFGMQ-PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKN--VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIE 701          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 86/216 (39.81%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            ELV LPLR P+LF   K +G  P KG+LLYGPPG+GKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  P+IIFIDE+DS   +R  +  E    + ++ + L DG  +   A V+V+ ATNRP+ +D A+ R  R  +  +IG+PD   R ++L++  K  K+ E++D + ++    G+ G+DL  +C +AA   IRE +D
Sbjct:  222 ELVELPLRHPQLF---KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS--RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMD 432          

HSP 2 Score: 149.443 bits (376), Expect = 1.499e-35
Identity = 84/223 (37.67%), Postives = 129/223 (57.85%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L E V  P+  PE F    +  P KGVL YGPPG GKT+LAKAIA E  A FI+++   L++ WFG+++  V  +F  A +  P ++F DE+DS   QR  S  +   A   +  + +   DG    +   V ++ ATNRP  +D A+LR  RL Q   I +PD + R QI K  L+   V +++D   LA   +GF+G+D+ E+C+++  ++IRE ++
Sbjct:  489 VKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIE 708          
The following BLAST results are available for this feature:
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
TERA_XENLA1.226e-3740.28Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_DANRE1.226e-3739.01Transitional endoplasmic reticulum ATPase OS=Danio... [more]
PSMR_METM51.226e-3745.83Proteasome-activating nucleotidase OS=Methanococcu... [more]
CDC48_SOYBN1.226e-3739.81Cell division cycle protein 48 homolog OS=Glycine ... [more]
CD48E_ARATH1.226e-3739.81Cell division control protein 48 homolog E OS=Arab... [more]
CD48A_ARATH1.226e-3739.81Cell division control protein 48 homolog A OS=Arab... [more]
TERA_PIG1.602e-3740.28Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
PSMR_METB62.092e-3744.13Proteasome-activating nucleotidase OS=Methanoregul... [more]
TERA_DROME2.732e-3738.43Transitional endoplasmic reticulum ATPase TER94 OS... [more]
CD48D_ARATH2.732e-3739.81Cell division control protein 48 homolog D OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00451 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00451 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623360 ID=BQ623360; Name=BQ623360; organism=Citrus sinensis; type=EST; length=658bp
CTATCAAGCAAGCTTTGTATGAATTGGTGATTCTTCCTTTACGAAGGCCG
GAGTTGTTTTCTCATGGGAAGCTTCTCGGTCCCCAGAAAGGAGTTCTGTT
GTATGGACCTCCTGGTACCGGAAAGACCATGCTTGCCAAAGCTATTGCAA
AAGAGTCCGGTGCTGTTTTCATTAATGTTAGGATATCAAATTTGATGAGC
AAGTGGTTTGGTGATGCTCAGAAACTCGTGGCTGCTGTATTTAGCTTGGC
CTATAAACTCCAGCCTGCTATTATATTTATTGATGAGGTTGACAGCTTTT
TGGGTCAGCGTCGTACTTCAGACCATGAAGCATTGACAAATATGAAGACT
GAGTTTATGGCTTTATGGGATGGGTTTACAACAGATCAAAATGCCCGTGT
GATGGTTCTTGCGGCAACTAATCGTCCGTCAGAACTTGATGAAGCAATAC
TTCGGCGTCTCCCTCAAGCCTTTGAAATTGGGATGCCAGACCGCAAGGAG
AGGGCTCAGATACTGAAGGTGATTTTAAAGGGTGAGAAGGTCGAAGAGAA
CATAGACTTTGACTATTTAGCCGGTTTGTGTGAGGGATTCACGGGTTCAG
ACCTTCTTGAAGTTTGCAAGCAAGCAGCCTACTTTTCTATTAGGGAACTA
CTAGATGA
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