BQ623360

Overview
NameBQ623360
Unique NameBQ623360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35
Identity = 89/219 (40.64%), Postives = 131/219 (59.82%), Query Frame = 3
Query:    9 QALYELVILPLRRPELFSHGKL-LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQR----RTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            + L E+V LPL  PE F   KL + P KG++LYGPPGTGKT+ A+A+A  + A FI V  S L+ K+ G+  ++V  +F +A   +  IIF DE+D+  G R       D+E    M  E +   DGF  D    + VL ATNRP+ LDEA++R  R+ +  E G+PD + RA IL++  K   ++++I ++ +A LC   TG++L  VC +A  F+IR
Sbjct:  189 ERLREVVELPLLSPERFV--KLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTM-LELITQLDGF--DPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIR 402          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.362e-35
Identity = 90/218 (41.28%), Postives = 129/218 (59.17%), Query Frame = 3
Query:    9 QALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQR---RTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRE 647
            Q L E + LPL+ PELF    +  P KGVLLYGPPG GKT++AKA+A E  A FI V  S L+ K+ G+  +LV  +F LA +  PAIIFIDE+D+   +R    T     +     + +A  DGF  D +  V ++AATNRP  LD A+LR  R  +  E+ +P+ K R +ILK+  K   + + +D   +A + EG +G+DL  +  +A  F+IR+
Sbjct:  149 QELREAIELPLKHPELFEKVGI-EPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGF--DPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRD 362          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35
Identity = 91/219 (41.55%), Postives = 126/219 (57.53%), Query Frame = 3
Query:    9 QALYELVILPLRRPELFSHGKL-LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT----SDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            + + E+V LP+  PE F   KL + P KGVL YGPPGTGKT+LA+A+A  + A FI V  S L+ K+ G+  ++V  +F +A   +  I+F DEVD+  G R       D+E    M  E +   DGF  D    + VL ATNRP  LD A+LR  RL +  E G+PD + R QI K+  +    E +I F+ LA LC   TG+D+  VC +A  ++IR
Sbjct:  177 EKMREVVELPMLHPEKFV--KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF--DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 390          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35
Identity = 91/219 (41.55%), Postives = 126/219 (57.53%), Query Frame = 3
Query:    9 QALYELVILPLRRPELFSHGKL-LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT----SDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            + + E+V LP+  PE F   KL + P KGVL YGPPGTGKT+LA+A+A  + A FI V  S L+ K+ G+  ++V  +F +A   +  I+F DEVD+  G R       D+E    M  E +   DGF  D    + VL ATNRP  LD A+LR  RL +  E G+PD + R QI K+  +    E +I F+ LA LC   TG+D+  VC +A  ++IR
Sbjct:  178 EKMREVVELPMLHPEKFV--KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF--DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35
Identity = 90/220 (40.91%), Postives = 130/220 (59.09%), Query Frame = 3
Query:   15 LYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRR----TSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            L E V LPL +PELF    +  P KGVLLYGPPGTGKT+LAKA+A  + A FI +  S L+ K+ G+  ++V  +F LA +  P+IIFIDE+DS +G +R    TS    +     + +A  DGF  D    V +LAATNRP  LD A+LR  R  +  ++ MP  + R QILK+  +   + +++D   +A + +  +G+DL  +  +A  F+IR   D
Sbjct:  171 LKETVELPLLKPELFQKVGI-EPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDS-IGAKRLDSITSGDREVQRTLVQLLAEMDGF--DPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRD 386          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35
Identity = 86/215 (40.00%), Postives = 127/215 (59.07%), Query Frame = 3
Query:   15 LYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQR---RTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            L E+V LPL  PELF    +  P KG LL+GPPGTGKT+LA+A+A +    F+ V  S ++ K+ G++ +++  +F+ A   QP I+F+DE+D+  G+R    TS    +     E +   DGF  D   +V V+ ATNRP  LD A+LR  RL +  EIG+P+ + R +ILK+          IDF+ +  L +GF+ +DL  VC +A  F+IR
Sbjct:  162 LREVVELPLINPELFKRVGIT-PPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF--DSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIR 373          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 87/217 (40.09%), Postives = 128/217 (58.99%), Query Frame = 3
Query:    9 QALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRR---TSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            + + E V LPL +P+LF    +  P KGVLLYGPPGTGKT+LA+A+A ++ A F+ V  S L+ K+ G+  +LV  +F LA +  P+IIFIDE+D+    R    TS    +     + +A  DGF  D    V ++AATNR   LD A+LR  R  +  EI +PD + R  ILK+  +   + E+++   ++ L EG  G+DL  +C +A  F+IR
Sbjct:  163 EEIREAVELPLTKPQLFEKVGI-SPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGF--DNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIR 376          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 88/215 (40.93%), Postives = 129/215 (60.00%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKL-LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQR---RTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRE 647
            E V LP+ RP+LF   K+ + P KGVLLYGPPGTGKT+LAKA+A E+ A+F++   S L+ K+ G+  +LV  +F LA +  P+I+FIDE+D+    R    TS    +     + +A  DGF  +    V ++ ATNR   LD A+LR  R  +  EI +PD + R  ILKV  +   + E++D   +A L EG  G++L  +C +A  F+IR+
Sbjct:  167 EAVELPMTRPDLFE--KIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGF--EPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRK 377          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 91/219 (41.55%), Postives = 126/219 (57.53%), Query Frame = 3
Query:    9 QALYELVILPLRRPELFSHGKL-LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT----SDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            + + E+V LP+  PE F   KL + P KGVL YGPPGTGKT+LA+A+A  + A FI V  S L+ K+ G+  ++V  +F +A   +  I+F DEVD+  G R       D+E    M  E +   DGF  D    + VL ATNRP  LD A+LR  RL +  E G+PD + R QI K+  +    E +I F+ LA LC   TG+D+  VC +A  ++IR
Sbjct:  178 EKMREVVELPMLHPEKFV--KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF--DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 91/219 (41.55%), Postives = 126/219 (57.53%), Query Frame = 3
Query:    9 QALYELVILPLRRPELFSHGKL-LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT----SDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            + + E+V LP+  PE F   KL + P KGVL YGPPGTGKT+LA+A+A  + A FI V  S L+ K+ G+  ++V  +F +A   +  I+F DEVD+  G R       D+E    M  E +   DGF  D    + VL ATNRP  LD A+LR  RL +  E G+PD + R QI K+  +    E +I F+ LA LC   TG+D+  VC +A  ++IR
Sbjct:  178 EKMREVVELPMLHPEKFV--KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF--DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391          
The following BLAST results are available for this feature:
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
PRS7_SCHPO3.340e-3540.6426S protease regulatory subunit 7 homolog OS=Schiz... [more]
PSMR_THEON4.362e-3541.28Proteasome-activating nucleotidase OS=Thermococcus... [more]
PRS7_PRUPE5.697e-3541.5526S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH5.697e-3541.5526S protease regulatory subunit 7 homolog A OS=Ara... [more]
PSMR_UNCMA7.440e-3540.91Proteasome-activating nucleotidase OS=Uncultured m... [more]
PRS10_CAEEL7.440e-3540.00Probable 26S protease regulatory subunit S10B OS=C... [more]
PSMR_METMJ9.717e-3540.09Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_METHJ9.717e-3540.93Proteasome-activating nucleotidase OS=Methanospiri... [more]
PRS7_SPIOL9.717e-3541.5526S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ9.717e-3541.5526S protease regulatory subunit 7 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00451 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00451 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623360 ID=BQ623360; Name=BQ623360; organism=Citrus sinensis; type=EST; length=658bp
CTATCAAGCAAGCTTTGTATGAATTGGTGATTCTTCCTTTACGAAGGCCG
GAGTTGTTTTCTCATGGGAAGCTTCTCGGTCCCCAGAAAGGAGTTCTGTT
GTATGGACCTCCTGGTACCGGAAAGACCATGCTTGCCAAAGCTATTGCAA
AAGAGTCCGGTGCTGTTTTCATTAATGTTAGGATATCAAATTTGATGAGC
AAGTGGTTTGGTGATGCTCAGAAACTCGTGGCTGCTGTATTTAGCTTGGC
CTATAAACTCCAGCCTGCTATTATATTTATTGATGAGGTTGACAGCTTTT
TGGGTCAGCGTCGTACTTCAGACCATGAAGCATTGACAAATATGAAGACT
GAGTTTATGGCTTTATGGGATGGGTTTACAACAGATCAAAATGCCCGTGT
GATGGTTCTTGCGGCAACTAATCGTCCGTCAGAACTTGATGAAGCAATAC
TTCGGCGTCTCCCTCAAGCCTTTGAAATTGGGATGCCAGACCGCAAGGAG
AGGGCTCAGATACTGAAGGTGATTTTAAAGGGTGAGAAGGTCGAAGAGAA
CATAGACTTTGACTATTTAGCCGGTTTGTGTGAGGGATTCACGGGTTCAG
ACCTTCTTGAAGTTTGCAAGCAAGCAGCCTACTTTTCTATTAGGGAACTA
CTAGATGA
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