BQ623360

Overview
NameBQ623360
Unique NameBQ623360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.077e-25
Identity = 78/218 (35.78%), Postives = 119/218 (54.59%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT---SDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            KQ   E+V   L++PE F+      P KGVLL GPPGTGKT+LAKAIA E+G  F ++  S  +  + G     V  +F  A +  P I+F+DE+D+   QR T     ++       + +   DGF  + N  ++V+AATNR   LD A+LR  R  +   + +PD + R +ILKV    +K + ++  + +A    GF+G+DL  +  +AA  + R
Sbjct:  223 KQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGF--EGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGR 436          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.406e-25
Identity = 73/195 (37.44%), Postives = 106/195 (54.36%), Query Frame = 3
Query:   87 KGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSF-------LGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            KG LL GPPGTGKT+LA+A+A E+G  F +   S  +  + G     V  +F  A    P I+FIDE+D+        LG       + +  + TE     DGF    N+ V+VLAATNRP  LD A+LR  R  +   +  PD   R +IL+V  +G+ + +++DF+ +A    GFTG+DL  +  +AA  + R
Sbjct:  266 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEM----DGFA--GNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAAR 454          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 77/218 (35.32%), Postives = 118/218 (54.13%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT---SDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            KQ L E+V   L+ P  FS      P KGVLL GPPGTGKT+LA+A+A E+G  F ++  S+ +  + G     V  +F  A K  P IIFIDE+D+   QR       H+       + +   DGF+   N  ++++AATNR   LD A+LR  R  +  ++  PD   R ++LKV  + + + ++++   +A    GF+G+DL  +  +AA  + R
Sbjct:  175 KQELVEVVEF-LKDPRKFSAIGARIP-KGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSA--NEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAAR 388          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.399e-25
Identity = 71/211 (33.65%), Postives = 117/211 (55.45%), Query Frame = 3
Query:   12 ALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQ---PAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAA 629
            +L E++ +PL  PE   H   L   KGVLL GPPG GKT+L KA+A+E GA  I +    +     G++++ +  +F  A +     PA++FIDEVD+   +R  S+      +  + + L DG  +D   +++ +AAT+RP  +D A+ R  R  +   IG P  K+R  IL++++     + ++D   LA +  G+ G+DL  +C+ AA
Sbjct:  202 SLKEIIHMPLHYPETM-HKLGLPCPKGVLLIGPPGVGKTLLVKAVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNSAPENRVVAQLLTLMDGIDSDN--KMVTVAATSRPDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDAAALADVTVGYVGADLTALCRDAA 409          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.399e-25
Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 3
Query:   87 KGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT---SDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELL 653
            KG LL GPPGTGKT+LA+A+A E+G  F +   S  +  + G     V  +F  A    P I+FIDE+D+   QR       ++       + +   DGF+   N+ V+VLAATNRP  LD A+LR  R  +   +  PD   R +IL+V  +G+ + +++DF+ +A    G+TG+DL  +  +AA  + R  L
Sbjct:  287 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARREL 478          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.133e-25
Identity = 73/216 (33.80%), Postives = 119/216 (55.09%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE--ALTNMKTEFMALWDGFT--TDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKER-AQILKVILKGEKVEENIDFDYLA-GLCEGFTGSDLLEVCKQA 626
            +K A+ E + LPL RPELF+ G  +  + G+L YGPPGTGKT+LAKAIA E    F +V+   L++ + G+++  V  VF  A   +P ++F DE+DS   +R         +  + ++ +A  DG +   D +  V V+ ATNRP  LD A+LR  R  +   +G+ D  ++  +IL+ + +   +  ++    +A  L   +TG+D   +C  A
Sbjct: 1002 VKDAVTETIQLPLERPELFAKG--MKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDA 1215          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PEX6_DICDI (Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.133e-25
Identity = 67/214 (31.31%), Postives = 121/214 (56.54%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE--ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKE-RAQILKVILKGEKVEENIDFDYLAGLCE-GFTGSDLLEVCKQA 626
            +K  + + + LPL  P LF+ G  +G + G+LL+GPPGTGKT+LAKAIA E    F++V+   L++ + G+++K +  +F+ A + +P +IF DE+DS    R         +  + ++ +A  DG    +++ V ++ ATNRP  LD +++R  RL +   +G+   KE + +IL+ + +   + +++D   +   C    TG+D   +   A
Sbjct:  927 VKSEIMDTIQLPLEHPHLFASG--IGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGM--QKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDA 1136          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.133e-25
Identity = 77/221 (34.84%), Postives = 122/221 (55.20%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTN-MKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            ++  L E +  P + P+LF    L   + G+LLYGP G GKT+LA AIA E G  FI+V+   L++K+ G +++ V  VFS A   +P ++F DE DS +  RR  D+  +T+ +  +F+   DG   +    V VLAAT+RP  +D A+LR  RL ++    +P+  ER  IL  +     +  +I  + L+   + +TG+DL  +   A   SI E ++
Sbjct:  874 VRAMLKETIEWPTKYPKLFQSSPLR-LRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDS-IAPRRGHDNSGVTDRVVNQFLTQLDG--VEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSIHEWMN 1090          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 71/218 (32.57%), Postives = 116/218 (53.21%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELL 653
            K  L E +  P +   +FS   L   + G+LLYG PG GKT+LA A+A + G  FI+++   +++K+ G +++ V  +F  A   +P I+F DE DS   +R          +  + +   DG   +    V VLAAT+RP  +D A+LR  RL ++    MPD  +R  IL+ + +   V ++++   +AG C GF+G+DL  +   A   ++ E L
Sbjct:  808 KSILLETLEWPTKYAPIFSSCPLR-LRSGILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDG--AEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKL 1022          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.116e-25
Identity = 80/222 (36.04%), Postives = 114/222 (51.35%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSF-------LGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            K+ L E+V   L+ P  F       P KGVLL GPPGTGKT+LAKAIA E+   F ++  S  +  + G     V  +F  A +  P ++FIDE+D+        +G       + L  + TE     DGF  + N  V+V+AATNR   LD A+LR  R  +   + MPD K R  ILKV    +K+   +  + +A    GF G+DL  +  +AA  ++R
Sbjct:  163 KEELAEVVAF-LKNPSKFLAVGASIP-KGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEM----DGF--EGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVR 376          
The following BLAST results are available for this feature:
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
FTSH2_ORYSJ1.077e-2535.78Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH1_ORYSJ1.406e-2537.44Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH_BACPF1.837e-2535.32Cell division protease ftsH homolog OS=Bacillus ps... [more]
SPA5L_XENTR2.399e-2533.65Spermatogenesis-associated protein 5-like protein ... [more]
FTSH_TOBAC2.399e-2536.60Cell division protease ftsH homolog, chloroplastic... [more]
PEX6_GLOLA3.133e-2533.80Peroxisomal biogenesis factor 6 OS=Glomerella lage... [more]
PEX6_DICDI3.133e-2531.31Peroxisomal biogenesis factor 6 OS=Dictyostelium d... [more]
PEX1_DICDI3.133e-2534.84Peroxisome biogenesis factor 1 OS=Dictyostelium di... [more]
PEX1_PICPA6.980e-2532.57Peroxisome biosynthesis protein PAS1 OS=Pichia pas... [more]
FTSH_CYAME9.116e-2536.04Cell division protease ftsH homolog OS=Cyanidiosch... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00451 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00451 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623360 ID=BQ623360; Name=BQ623360; organism=Citrus sinensis; type=EST; length=658bp
CTATCAAGCAAGCTTTGTATGAATTGGTGATTCTTCCTTTACGAAGGCCG
GAGTTGTTTTCTCATGGGAAGCTTCTCGGTCCCCAGAAAGGAGTTCTGTT
GTATGGACCTCCTGGTACCGGAAAGACCATGCTTGCCAAAGCTATTGCAA
AAGAGTCCGGTGCTGTTTTCATTAATGTTAGGATATCAAATTTGATGAGC
AAGTGGTTTGGTGATGCTCAGAAACTCGTGGCTGCTGTATTTAGCTTGGC
CTATAAACTCCAGCCTGCTATTATATTTATTGATGAGGTTGACAGCTTTT
TGGGTCAGCGTCGTACTTCAGACCATGAAGCATTGACAAATATGAAGACT
GAGTTTATGGCTTTATGGGATGGGTTTACAACAGATCAAAATGCCCGTGT
GATGGTTCTTGCGGCAACTAATCGTCCGTCAGAACTTGATGAAGCAATAC
TTCGGCGTCTCCCTCAAGCCTTTGAAATTGGGATGCCAGACCGCAAGGAG
AGGGCTCAGATACTGAAGGTGATTTTAAAGGGTGAGAAGGTCGAAGAGAA
CATAGACTTTGACTATTTAGCCGGTTTGTGTGAGGGATTCACGGGTTCAG
ACCTTCTTGAAGTTTGCAAGCAAGCAGCCTACTTTTCTATTAGGGAACTA
CTAGATGA
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