BQ623362

Overview
NameBQ623362
Unique NameBQ623362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:598..1182. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.037e-15
Identity = 45/149 (30.20%), Postives = 65/149 (43.62%), Query Frame = 2
Query:  122 ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV--RKC--VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 556
            +  W Y   HG+  E C+ Y          C+       C   ++C  +K   LW+   + S+S        E +MAEIY NGP+       E  ++Y  G+Y          H V + GWG S DG +YWI+ N W   WG  G+ +I
Sbjct:  139 LPVWEYAHRHGIPDETCNNY----QAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLSGR------EKMMAEIYTNGPISCGIMATEKMSNYTGGIYSEYNDQAFINHIVSVAGWGVS-DGMEYWIVRNSWGEPWGEHGWMRI 276          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.656e-13
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 2
Query:  302 AYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AY + S+ + +   +++ GPV V+  V  D  +YKSGV KH + D    H V L+G+G  +D + YW L N W   WG  G+F+IKR  N CGI
Sbjct:  242 AYDLRSEKK-LRQVLHEKGPVSVAIDVV-DLTNYKSGVAKHCSVDHGLNHGVLLVGYGQENDVK-YWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.819e-13
Identity = 56/190 (29.47%), Postives = 78/190 (41.05%), Query Frame = 2
Query:   38 GMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAE-IYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            G N+SLS                    P  A+ Y  ++G + TEE  PY    G  H   E                    N+    + +  I  + ED +   +    PV V+F V + F  YKSGVY   T D  G       HAV  +G+G  ++G  YW++ N W   WG +GYFK++ G N C I
Sbjct:  186 GKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAE--------------------NAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVY---TSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAI 351          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.294e-13
Identity = 54/161 (33.54%), Postives = 73/161 (45.34%), Query Frame = 2
Query:  119 PISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAE-IYKNGPVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            P  A+ Y +++ G++ E+  PY    G      E A    K V                      I  + E  M E +    PV  +F V EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W  +WG +GYF I+RG N CG+
Sbjct:  184 PSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNV--------------------VNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGL 322          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.074e-12
Identity = 38/79 (48.10%), Postives = 47/79 (59.49%), Query Frame = 2
Query:  359 PVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            PV  +F V EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W   WG +GYF I+RG N CG+
Sbjct:  246 PVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGL 322          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12
Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 2
Query:  359 PVEVSFTVYEDFAHYKSGVYKHIT-GDVMG--GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            PV V+F V + F  YKSGVY     GD      HAV  +G+G  ++G  YW++ N W   WG DGYFK++ G N CG+
Sbjct:  270 PVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGV-ENGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGV 346          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_PLAF7 (Probable cathepsin C OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0174 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12
Identity = 46/134 (34.33%), Postives = 63/134 (47.01%), Query Frame = 2
Query:  257 KKNQLWRNSKHYSISAYRIN--SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVY--------------------KHITGDVMGGHAVKLIGWGTSD-DGE--DYWILANQWNRSWGADGYFKIKRGSNECGI 583
            ++N+ +    +Y    Y  N  +  + +M EIY+NGP+  SF    DF  Y  GVY                     +ITG     HA+ L+GWG  + +G+   YWI  N W   WG +GYFKI RG N  GI
Sbjct:  538 EENRWYAKDFNYVGGCYGCNQCNGEKIMMNEIYRNGPIVSSFEASPDFYDYADGVYFVEDFPHARRCTIEPKNDGVYNITGWDRVNHAIVLLGWGEEEINGKLYKYWIGRNSWGNGWGKEGYFKILRGQNFSGI 671          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.392e-12
Identity = 36/81 (44.44%), Postives = 46/81 (56.79%), Query Frame = 2
Query:  359 PVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            PV V+F V   F  YKSGVY   T D  G       HAV  +G+G  +DG  YW++ N W   WG +GYFK++ G N CG+
Sbjct:  274 PVSVAFEVITGFRLYKSGVY---TSDHCGTTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGV 350          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.392e-12
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 2
Query:  317 SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            +D E ++  +    PV  +F V  DF  Y+ G+Y     H T D +  HAV  +G+G  ++G  YWI+ N W   WG +GYF I+RG N CG+
Sbjct:  234 NDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVN-HAVLAVGYG-EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 324          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 3.124e-12
Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 2
Query:  320 DPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            D E ++  +    PV  +F V +DF  Y++G+Y     H T D +  HAV  +G+G  + G  YWI+ N W   WG +GYF I+RG N CG+
Sbjct:  235 DEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVN-HAVLAVGYGEKN-GIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 324          
The following BLAST results are available for this feature:
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CATZ_BOVIN1.037e-1530.20Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2[more]
CATV_GVXN1.656e-1341.49Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
ALEU_HORVU4.819e-1329.47Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATH_RAT6.294e-1333.54Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_MOUSE1.074e-1248.10Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP3_SOLLC1.402e-1244.87Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATC_PLAF71.402e-1234.33Probable cathepsin C OS=Plasmodium falciparum (iso... [more]
CYSP2_MAIZE2.392e-1244.44Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATH_PIG2.392e-1238.71Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_HUMAN3.124e-1239.13Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00453 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00453 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623362 ID=BQ623362; Name=BQ623362; organism=Citrus sinensis; type=EST; length=585bp
TGTTGAAGCGCTATCTGATCGTTTCTGCATCCATTTTGGCATGAACCTAT
CTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGCTTTTTGTGTGGAGAT
GGTTGTGACGGGGGTTATCCAATTTCTGCATGGCGATACTTTGTCCACCA
TGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTGATAGTACTGGCTGTT
CCCACCCTGGTTGTGAGCCGGCATATCCTACTCCAAAGTGTGTGAGGAAG
TGCGTCAAGAAAAACCAGCTTTGGAGGAATTCAAAGCACTACAGTATTAG
TGCATATAGAATCAATTCTGATCCAGAGGACATAATGGCAGAAATTTACA
AGAATGGACCAGTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCAC
TACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCA
TGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACT
GGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGGTACTTC
AAGATTAAAAGAGGATCAAATGAGTGTGGTATTGA
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