BQ623362

Overview
NameBQ623362
Unique NameBQ623362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:598..1182. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.124e-12
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 2
Query:  317 SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            +D E ++  +  + PV  +F V  DF  Y+ G+Y     H T D +  HAV  +G+G  + G  YWI+ N W  +WG  GYF I+RG N CG+
Sbjct:  234 NDEEAMVEAVALHNPVSFAFEVTADFMMYRKGIYSSTSCHKTPDKVN-HAVLAVGYG-EEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGL 324          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 2
Query:  359 PVEVSFTVYEDFAHYKSGVY--KHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            PV ++F V   F  YKSGVY   H     M   HAV  +G+G  +DG  YW++ N W   WG  GYFK++ G N CGI
Sbjct:  272 PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGI 348          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.328e-12
Identity = 36/81 (44.44%), Postives = 46/81 (56.79%), Query Frame = 2
Query:  359 PVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            PV V+F V   F  YKSGVY   T D  G       HAV  +G+G  ++G  YW++ N W   WG +GYFK++ G N CGI
Sbjct:  276 PVSVAFQVINGFRMYKSGVY---TSDHCGTSPMDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGI 352          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.959e-12
Identity = 57/193 (29.53%), Postives = 83/193 (43.01%), Query Frame = 2
Query:   35 FGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKN---QLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGG------HAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            FG  +SLS                    P  A+ Y  ++G + TEE  PY    G    GC           K   KN   Q+ R+S + ++ A       +++   +    PV V+F V  +F  YK GV+   T +  G       HAV  +G+G  DD   YW++ N W   WG +GYFK++ G N CG+
Sbjct:  182 FGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG----GC-----------KFSAKNIGVQV-RDSVNITLGA------EDELKHAVGLVRPVSVAFEVVHEFRFYKKGVF---TSNTCGNTPMDVNHAVLAVGYGVEDD-VPYWLIKNSWGGEWGDNGYFKMEMGKNMCGV 348          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.088e-12
Identity = 46/129 (35.66%), Postives = 64/129 (49.61%), Query Frame = 2
Query:  215 EPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG----SNECGI 583
            E  YP      KC   N L +NS+  +I  Y  + S  E  +       PV V+       F HY+SG++    G  M  HAV  +G+G S++G DYWI+ N W   WG DGY +++R     S +CGI
Sbjct:  184 EKDYPYHGTNGKC---NSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMD-HAVVAVGYG-SENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGI 307          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = 2
Query:  320 DPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG-SNECGI 583
            D E +   +   GPV V+    +E F  Y  GVY     D     H V ++G+GT + G DYW++ N W  +WG  GY K+ R  +N+CGI
Sbjct:  240 DEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGI 330          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.025e-11
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 2
Query:  353 NGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            NGP+ V+  V  D  +YK+G+      +    HAV L+G+G  +D   YWIL N W   WG +GYF+++R  N CG+
Sbjct:  249 NGPISVAIDV-SDLINYKAGIADICENNEGLNHAVLLVGYGVKND-VPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.025e-11
Identity = 44/150 (29.33%), Postives = 64/150 (42.67%), Query Frame = 2
Query:  146 HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG----SNECGI 583
            ++GV TEE  PY    G  +    P                   NS + +  +Y   +D   +M  +  N P+       E+F +Y  GV+    G  +  HA+ +IG+G    G  YWI+ N W  SWG  GY ++ RG    S  CGI
Sbjct:  199 NNGVTTEENYPYLAYQGTCNANSFP-------------------NSAYITGYSYVRRNDERSMMYAV-SNQPIAALIDASENFQYYNGGVFSGPCGTSLN-HAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGI 327          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.644e-11
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 2
Query:  320 DPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            D   ++  +YKNGP+ V+     D   Y+SG+   +  D    HAV L+G+G  +D   YWI  N W  +WG +GYF+ +R  N CG+
Sbjct:  242 DERKLLELLYKNGPIAVAIDCV-DIIDYRSGIAT-VCNDNGLNHAVLLVGYGIEND-TPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.454e-11
Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 2
Query:  356 GPVEVSFTV-YEDFAHYKSGVYKHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG-SNECGI 583
            GPV V+    +E F  Y  GVY     D     H V ++G+GT + GEDYW++ N W  +WG  G+ K+ R   N+CGI
Sbjct:  284 GPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGI 362          
The following BLAST results are available for this feature:
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CATH_BOVIN3.124e-1238.71Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ALEU_ARATH4.080e-1244.87Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
ORYC_ORYSJ5.328e-1244.44Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
ALEUL_ARATH6.959e-1229.53Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CYSP4_BRANA9.088e-1235.66Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CATL_SARPE1.550e-1137.36Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATV_GVCP2.025e-1140.26Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
BROM1_ANACO2.025e-1129.33Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATV_NPVST2.644e-1137.50Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATL_DROME3.454e-1140.51Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00453 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00453 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623362 ID=BQ623362; Name=BQ623362; organism=Citrus sinensis; type=EST; length=585bp
TGTTGAAGCGCTATCTGATCGTTTCTGCATCCATTTTGGCATGAACCTAT
CTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGCTTTTTGTGTGGAGAT
GGTTGTGACGGGGGTTATCCAATTTCTGCATGGCGATACTTTGTCCACCA
TGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTGATAGTACTGGCTGTT
CCCACCCTGGTTGTGAGCCGGCATATCCTACTCCAAAGTGTGTGAGGAAG
TGCGTCAAGAAAAACCAGCTTTGGAGGAATTCAAAGCACTACAGTATTAG
TGCATATAGAATCAATTCTGATCCAGAGGACATAATGGCAGAAATTTACA
AGAATGGACCAGTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCAC
TACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCA
TGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACT
GGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGGTACTTC
AAGATTAAAAGAGGATCAAATGAGTGTGGTATTGA
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