BQ623363

Overview
NameBQ623363
Unique NameBQ623363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7118 contig Csv1_Contig7118:24..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 572
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSN 199          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26
Identity = 66/167 (39.52%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 572
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +    N  Y K ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSN 199          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.643e-26
Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 569
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGS 191          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.643e-26
Identity = 67/166 (40.36%), Postives = 92/166 (55.42%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 572
            + DFCV     +D     G  C  P +VT +DF F+GL  A        + VT   V   P +N LG+SL R+D    G  P HTHP ASE+L V  G +  GF++S+  N ++ KTL +GD+ +FPQGL+HFQVN G   A+ F   +S NPG+      +F +N
Sbjct:   28 LQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSN 193          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.676e-26
Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 569
            + DFCVAD+       G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   28 LQDFCVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGS 191          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.133e-25
Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 569
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP GL+HFQ N      A+   + +S NPG+     A+F +
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGS 191          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 65/164 (39.63%), Postives = 93/164 (56.71%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 569
            + DFCVAD+       G+ C+ P  V AD F  +        T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FPQGL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   28 LQDFCVADMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGS 191          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.933e-25
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN 572
            + DFCVADL       G+ C  P   +ADDF  +  L    +T + + + VT   V Q P +N LG+S+ARLD A  G+ P HTHP A+EI  V+ G +  GF++S+  N +  K L KGD+ +FP+GL+HFQ N      A+   + +S NPG+     A+F +N
Sbjct:   30 LQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSN 195          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.524e-25
Identity = 64/164 (39.02%), Postives = 93/164 (56.71%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 569
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   29 LQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGS 192          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25
Identity = 65/164 (39.63%), Postives = 93/164 (56.71%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 569
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K LKKGD+ +FP GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   29 LQDFCVADEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGS 192          
The following BLAST results are available for this feature:
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL36_ORYSJ2.982e-2639.52Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ5.086e-2639.52Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL88_ORYSJ6.643e-2639.63Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL19_ARATH6.643e-2640.36Putative germin-like protein subfamily 1 member 9 ... [more]
GL810_ORYSJ8.676e-2639.02Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL89_ORYSJ1.133e-2539.63Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL85_ORYSJ1.480e-2539.63Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ1.933e-2539.76Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ2.524e-2539.02Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ3.297e-2539.63Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00454 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00454 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623363 ID=BQ623363; Name=BQ623363; organism=Citrus sinensis; type=EST; length=678bp
AATAACTACACTAAATATTAGTCAAAATGCTTCACATTCTCTTCTTCTTC
CTTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGT
CGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCC
CCGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCC
GGAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGC
TCAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATC
TTGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAA
ATCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTC
AGCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATATCATGATCT
TTCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGTGCGGACGGAGCC
CTCGGTTTTGTTAGCTTCAACAGCCCGAATCCTGGACTCCAAATCACCGA
TTTCGCCTTATTTGCTAACAACTTGTCTTCCCAATTGGTGGAGCAGACCA
CTTTCCTTGACGATGCTACGGGGAAGAGGCTCAAGGCTATCCTTGGTGGC
ACCGGCTAGGCTTATTAGTTACCACATT
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