BQ623375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_YEAST (40S ribosomal protein S23 OS=Saccharomyces cerevisiae GN=RPS23A PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.809e-57 Identity = 108/142 (76.06%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPRS 488 G+ RG+ + RKL+ HRR RWA+ +YKK LG +K PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK VKVSGVSLLAL+KEKKEKPRS Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_SACCA (40S ribosomal protein S23 OS=Saccharomyces castellii GN=RPS23A PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.809e-57 Identity = 108/142 (76.06%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPRS 488 G+ RG+ + RKL+ HRR RWA+ +YKK LG +K PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK VKVSGVSLLAL+KEKKEKPRS Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_SACBA (40S ribosomal protein S23 OS=Saccharomyces bayanus GN=RPS23A PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.809e-57 Identity = 108/142 (76.06%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPRS 488 G+ RG+ + RKL+ HRR RWA+ +YKK LG +K PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK VKVSGVSLLAL+KEKKEKPRS Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_CANGA (40S ribosomal protein S23 OS=Candida glabrata GN=RPS23 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.809e-57 Identity = 108/142 (76.06%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPRS 488 G+ RG+ + RKL+ HRR RWA+ +YKK LG +K PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFK VKVSGVSLLAL+KEKKEKPRS Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_CIOIN (40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.296e-55 Identity = 108/142 (76.06%), Postives = 117/142 (82.39%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPRS 488 G+ G+ RKL + RR Q+W D YKKSHLG K PF G+SHAKGIVLEKIG+EAKQPNSAIRKC RVQLIKNGKKI AFVPNDGCLNYIEENDEVL+AGFGR GHAVGDIPGVRFK VKV+ VSL ALF KKE+PRS Sbjct: 2 GKPSGLRCARKLXNRRRDQKWHDXXYKKSHLGTALKANPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNYIEENDEVLVAGFGRSGHAVGDIPGVRFKIVKVANVSLHALFTGKKERPRS 143
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_GILMI (40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.693e-55 Identity = 103/142 (72.54%), Postives = 120/142 (84.51%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPRS 488 G+ RG+ RKL++HRR Q+W DK YKK+HLG K PF +SHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKKI AFVPNDGCLN+ EENDEVL+AGFGRK HAVGDIPGVRFK V+++ VSLLAL+K KE+P+S Sbjct: 2 GKCRGLRTARKLRNHRREQKWHDKQYKKAHLGTALKANPFGSASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFXEENDEVLVAGFGRKXHAVGDIPGVRFKVVEMANVSLLALYKGXKERPKS 143
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 3.772e-55 Identity = 103/142 (72.54%), Postives = 120/142 (84.51%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPRS 488 G+ G+ A RKL++HRR +RWAD YKK LG +K PF GSSHAKGIV+EKIG+EAKQPNSAIRKC RVQLIKNGKK+ AFVP+DGCLN+++ENDEVL++GFGRKG A GDIPGVRFK VKV+GV L ALF EKKEKPR+ Sbjct: 2 GKPAGLNAARKLRNHRREERWADAHYKKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHEKKEKPRA 143
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_TETTH (40S ribosomal protein S12 OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.752e-52 Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEK 479 G+ RG+ AGRKL HR+ QRWAD + K LG+ W+ PF G+SHAKG+V EKIGIE+KQPNSA+RKC RV L KN KKIAAFVP DGCLN++ ENDEVL+AG GR+GHAVGDIPGVRFK V V G+SLLALFK KKEK Sbjct: 4 GKPRGIRAGRKLARHRKDQRWADNDFNKRLLGSRWRNPFMGASHAKGLVTEKIGIESKQPNSAVRKCVRVLLRKNSKKIAAFVPMDGCLNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALFKGKKEK 141
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_DICDI (40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.304e-51 Identity = 96/140 (68.57%), Postives = 114/140 (81.43%), Query Frame = 3 Query: 66 GRHRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKP 482 G+ G+ RKL++HRR QRW DK YKK+H G K PF G+SHA GIV+ ++GIEAKQPNSAIRKC RVQL KNGKKI AFVPNDGCLNYI+END+VL+AG GR GH+VGDIPGVRFK VKVS VSL+A+++ K+KP Sbjct: 2 GKPNGLKTARKLRNHRRVQRWNDKLYKKAHFGTALKANPFGGASHASGIVVSRLGIEAKQPNSAIRKCVRVQLKKNGKKITAFVPNDGCLNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVKVSSVSLIAIYRGIKDKP 141
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_CENSY (30S ribosomal protein S12P OS=Cenarchaeum symbiosum GN=rps12p PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.701e-39 Identity = 83/138 (60.14%), Postives = 103/138 (74.64%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFG-RKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPR 485 G+ AGR LK+ ++RQRW+ YK+ LG + K P GS A+GIVLEK+G+EAKQPNSA+RKC RVQLIKNGK I AF+P DG +N+I+E+DEV + G G +G A+GDIPGVRFK KV+G SL L KKEKPR Sbjct: 7 GLFAGRVLKAKKKRQRWSISRYKRRELGLDRKANPMGGSPQARGIVLEKVGVEAKQPNSAVRKCVRVQLIKNGKSITAFLPRDGAMNFIDEHDEVHVEGMGATQGGAMGDIPGVRFKVFKVNGTSLHELVIGKKEKPR 144 The following BLAST results are available for this feature:
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623375 ID=BQ623375; Name=BQ623375; organism=Citrus sinensis; type=EST; length=573bpback to top |