BQ623375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_PICTO (30S ribosomal protein S12P OS=Picrophilus torridus GN=rps12p PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 9.333e-38 Identity = 75/136 (55.15%), Postives = 102/136 (75.00%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEK 479 G+ AG+KL R+ RW+D+ YK+ L + K P G+ AKGIV+EK+GIEAKQPNS IRKC ++QLIKNG++++AF P DG +NYI+E+DEV++ G GR G + GDIPGVR+K +KV+G+SL L K +KEK Sbjct: 4 GLNAGKKLMKSRKTYRWSDRDYKRRVLNLKKKSDPLEGAPQAKGIVIEKVGIEAKQPNSGIRKCVKIQLIKNGRQLSAFAPGDGAINYIDEHDEVVVEGIGGRMGRSKGDIPGVRYKVIKVNGISLHELVKGRKEK 139
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_PYRIL (30S ribosomal protein S12P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps12p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37 Identity = 78/137 (56.93%), Postives = 104/137 (75.91%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKP 482 G+ AG KLK R+R +W D +YK+ LG K P G+ A+GIVLEK+G+EA++PN+A+RKC RVQL+KNGK + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFK +KV+GVSL A+++ KK+KP Sbjct: 9 GLFAGGKLKRKRKRFKWNDITYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVIIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_PYRCJ (30S ribosomal protein S12P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps12p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37 Identity = 79/137 (57.66%), Postives = 104/137 (75.91%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKP 482 G+ AG KLK R++ RW D +YK+ LG K P G+ A+GIVLEK+G+EA++PN+A+RKC RVQL+KNGK + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFK VKV+GVSL A+++ KK+KP Sbjct: 9 GLFAGGKLKKKRQKFRWNDVTYKRRMLGLAEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPYDGGLNYINEHDEVIIERIGGPEGKSLGDIPGVRFKVVKVNGVSLWAIWRGKKQKP 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_PYRAE (30S ribosomal protein S12P OS=Pyrobaculum aerophilum GN=rps12p PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.049e-37 Identity = 78/137 (56.93%), Postives = 104/137 (75.91%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKP 482 G+ AG KLK R++ RW D +YK+ LG K P G+ A+GIVLEK+G+EA++PN+A+RKC RVQL+KNGK + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFK +KV+GVSL A+++ KK+KP Sbjct: 9 GLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_PYRAR (30S ribosomal protein S12P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps12p PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.901e-37 Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKP 482 G+ AG KLK R+R +W D +YK+ LG K P G+ A+GIVLEK+G+EA++PN+A+RKC RVQL+KNGK + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFK +KV+GVSL A++ KK+KP Sbjct: 9 GLFAGGKLKRKRKRFKWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWSGKKQKP 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_METKA (30S ribosomal protein S12P OS=Methanopyrus kandleri GN=rps12p PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.901e-37 Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKP 482 G A RKL+ R++ RW D+ YK+ L +E P G+ A+GIVLEK+G+EAKQPNSAIRKC RVQLIKNGK++ AF P DG ++YI+E+DEV+I G G KG A GDIPGVR+K VKV+ V+L L K K EKP Sbjct: 9 GEFAARKLREKRKKFRWKDERYKRRMLKLDEKADPLEGAPQARGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAIDYIDEHDEVVIEGIGGPKGRAKGDIPGVRYKVVKVNDVALSELLKGKIEKP 145
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_THEVO (30S ribosomal protein S12P OS=Thermoplasma volcanium GN=rps12p PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 77/136 (56.62%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEK 479 G+ AGRKL +R++ RW+D+ YK+ L + K P G+ AKGI +EK+GIEAKQPNSAIRKC +VQLIKNG++I AF DG +NYI+E+DEV + G GR G + GDIPGVR+K V V+G+SL L K +KEK Sbjct: 4 GLNAGRKLLENRKKFRWSDRDYKRRVLQLKRKSDPLEGAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDEVTVEGIGGRMGRSKGDIPGVRYKVVAVNGISLKELVKGRKEK 139
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_THECE (30S ribosomal protein S12P OS=Thermococcus celer GN=rps12p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 81/138 (58.70%), Postives = 100/138 (72.46%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKPR 485 G AGRKLK R++ RW+D YK+ L E P G+ AKGIVLEKI +EAKQPNSA+RK RVQLIKNGK + AF P DG +N+I+E+DEV+I G G KG ++GDIPG+R+K VKV+ VSL L K +KEKPR Sbjct: 9 GEFAGRKLKLKRKKFRWSDIRYKRRVLRLKEKSDPLEGAPQAKGIVLEKIAVEAKQPNSAMRKAVRVQLIKNGKVVTAFTPGDGAINHIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKELVKGRKEKPR 146
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS12_THEAC (30S ribosomal protein S12P OS=Thermoplasma acidophilum GN=rps12p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 77/136 (56.62%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEK 479 G+ AGRKL +R++ RW+D+ YK+ L + K P G+ AKGI +EK+GIEAKQPNSAIRKC +VQLIKNG++I AF DG +NYI+E+DEV + G GR G + GDIPGVR+K V V+G+SL L K +KEK Sbjct: 4 GINAGRKLLENRKKFRWSDRDYKRRVLQLKRKSDPLEGAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDEVTVEGIGGRMGRSKGDIPGVRYKVVAVNGISLKELVKGRKEK 139
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Match: RS23_ENCCU (40S ribosomal protein S23 OS=Encephalitozoon cuniculi GN=RPS23 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.299e-36 Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 3 Query: 78 GMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSS-HAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKGVKVSGVSLLALFKEKKEKP 482 G+ + L R+ +R AD +Y+K LG ++K G + AK IVLEKIG+EAKQPNSAIRK R QLI GKKI AFVP DG + YIE NDEV + GFG+KG +VGDIPG+RFK KV VSL A+F KKEKP Sbjct: 3 GLFSANNLIKSRKAKRLADTAYRKRALGTKYKHSVLGRAPQAKAIVLEKIGVEAKQPNSAIRKAVRCQLIATGKKITAFVPYDGSVTYIESNDEVTVEGFGKKGRSVGDIPGIRFKVCKVQNVSLHAIFTGKKEKP 138 The following BLAST results are available for this feature:
BLAST of BQ623375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623375 ID=BQ623375; Name=BQ623375; organism=Citrus sinensis; type=EST; length=573bpback to top |