BQ623387

Overview
NameBQ623387
Unique NameBQ623387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:446..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.457e-13
Identity = 37/130 (28.46%), Postives = 58/130 (44.62%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L     T   V+  + +   F   F+ A+  +   +PLTGT+G+IR  C+  N
Sbjct:  188 TIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKVN 314          

HSP 2 Score: 36.5798 bits (83), Expect = 3.457e-13
Identity = 19/56 (33.93%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D
Sbjct:  121 VAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLD 176          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.459e-13
Identity = 41/130 (31.54%), Postives = 55/130 (42.31%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            SVG  HC     RL    D A+ P     +  KC     DP        D+ T   +DN  Y  I   +G++ +D  L  D+ T   V   A S   F K F+ A+  +     LTG  GEIR+ C + N
Sbjct:  188 SVGVAHCSLFQDRLS---DRAMEPSLKSSLRRKCSSP-NDPTTFL----DQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFN 309          

HSP 2 Score: 35.8094 bits (81), Expect = 3.459e-13
Identity = 21/56 (37.50%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD V   GGP   + TGRRDG +S     +  LP     +S  ++ FAA G++
Sbjct:  122 LATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMN 175          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.484e-13
Identity = 39/139 (28.06%), Postives = 68/139 (48.92%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDY----FFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G   C  +  RL+        DP+++   +P +   CP    +  A + V  D G+    D +Y+ N+ + +G++  D +L TD  T+ +V++    +      F  EF R++  +S     TGT GEIRKVC+  N
Sbjct:  195 TIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQ---NGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVCSAIN 330          

HSP 2 Score: 35.4242 bits (80), Expect = 4.484e-13
Identity = 23/56 (41.07%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD VVA  G    + TGRRDGR SRA      LP   DS+ +   +F   G++
Sbjct:  129 LAARDSVVATRGLTWSVPTGRRDGRVSRAADAGD-LPAFFDSVDIQKRKFLTKGLN 183          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.811e-13
Identity = 50/145 (34.48%), Postives = 68/145 (46.90%), Query Frame = 2
Query:  200 GRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 595
            G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP + DN YY N+ + KGL+  D +L     ATD  T P V+  A S   FF  F  A+  +    PLTGT+G+IR  C + N    LHD
Sbjct:  203 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATD--TIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSLLHD 342          

HSP 2 Score: 24.2534 bits (51), Expect = 5.811e-13
Identity = 12/56 (21.43%), Postives = 27/56 (48.21%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + F  +G++
Sbjct:  133 IAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLN 188          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 5.814e-13
Identity = 42/136 (30.88%), Postives = 61/136 (44.85%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYP--EVDPALNPDHVPHM---LHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  C     RL P     PA + D++  +      C    P   +V   + D  TP   DN YY N+L  +GL+  D  LA  D  TR  V+  A  Q  FF++F  A  ++       G+  EIRK C + N
Sbjct:  218 TLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGP---SVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNA--MVKMGGIPGGSNSEIRKNCRMIN 348          

HSP 2 Score: 38.891 bits (89), Expect = 5.814e-13
Identity = 17/55 (30.91%), Postives = 30/55 (54.55%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            ++ RD VV  GGP   ++ GR+D R +  +     LP  N ++S ++  F  +G+
Sbjct:  151 MAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGL 205          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.829e-13
Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL 520
            ++G +HC     RL     + ++DP++N      +  KCP      K    V +   T  V DN YY+ IL  KG+   D  L  D RT+  V+  A+ Q  FF+EF+ ++  L
Sbjct:  192 TIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDS--TSSVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKL 303          

HSP 2 Score: 36.1946 bits (82), Expect = 5.829e-13
Identity = 21/55 (38.18%), Postives = 31/55 (56.36%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            ++ RD V   GGPY  +  GR+DG  SRA      LP    ++S +++ FAA G+
Sbjct:  126 IAARDVVTLSGGPYWSVLKGRKDGTISRANETRN-LPPPTFNVSQLIQSFAARGL 179          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 5.832e-13
Identity = 39/134 (29.10%), Postives = 64/134 (47.76%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYP---EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  C+    RLY    ++D   +         +CP    D         D+ TP   DNNYYRN++  KGL+  D  L  T   T   V + +++   F  +FS A+  + +   LTG+ G+IR++C+  N
Sbjct:  189 TLGQAQCLTFKGRLYDNSSDIDAGFSSTRK----RRCPVNGGDTTLAPL---DQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          

HSP 2 Score: 33.113 bits (74), Expect = 5.832e-13
Identity = 17/56 (30.36%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            ++ RD    +GGP   +K GRRD   +   I ++ LP+   S++ + E F   G++
Sbjct:  122 VAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLN 177          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 5.832e-13
Identity = 37/130 (28.46%), Postives = 58/130 (44.62%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L     T   V+  + +   F   F+ A+  +   +PLTGT+G+IR  C+  N
Sbjct:  188 TIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN 314          

HSP 2 Score: 36.5798 bits (83), Expect = 5.832e-13
Identity = 19/56 (33.93%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D
Sbjct:  121 VAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLD 176          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.542e-13
Identity = 39/135 (28.89%), Postives = 65/135 (48.15%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++GR+HC    +RLY        DP L+P +   +  +CP    +   V  V  +  +P + D  YY ++L N+GL   D  L TD  T   V++ A +   +  +F+ A+  + +   L G  G+IR  C + N
Sbjct:  229 TIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLV--VPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVIN 361          

HSP 2 Score: 27.335 bits (59), Expect = 7.542e-13
Identity = 17/54 (31.48%), Postives = 25/54 (46.30%), Query Frame = 3
Query:    6 SGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            + RD V   GG    +  GRRDGR S A      LP    ++  + + F+  G+
Sbjct:  163 AARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGL 216          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 9.818e-13
Identity = 38/141 (26.95%), Postives = 67/141 (47.52%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLY-PEVDPALNPDHVPH-------MLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKM---AKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  CV    R+  P ++     D           +  +C D+  D +       D  TP   DN+Y+ N+L+ +GL++ D+ L ++       +K+   A +QD FF +F  ++  +   N LTG +GEIR+ C   N
Sbjct:  198 TIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPL---DIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCRFVN 335          

HSP 2 Score: 35.8094 bits (81), Expect = 9.818e-13
Identity = 18/56 (32.14%), Postives = 29/56 (51.79%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD V   GGP+  +  GRRD  K+      Q++P  N S+  ++  F   G++
Sbjct:  131 LAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLN 186          
The following BLAST results are available for this feature:
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PER2_ORYSJ3.457e-1328.46Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER44_ARATH3.459e-1331.54Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PERN1_TOBAC4.484e-1328.06Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER1A_ARMRU5.811e-1334.48Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER40_ARATH5.814e-1330.88Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER66_ARATH5.829e-1331.58Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER4_ARATH5.832e-1329.10Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER2_ORYSI5.832e-1328.46Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER5_VITVI7.542e-1328.89Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER20_ARATH9.818e-1326.95Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00478 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00478 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623387 ID=BQ623387; Name=BQ623387; organism=Citrus sinensis; type=EST; length=668bp
TCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCT
CTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGA
GCAGTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGT
TTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACC
TTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTT
CAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCTTGGTTCTTC
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