BQ623388

Overview
NameBQ623388
Unique NameBQ623388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9343 contig Csv1_Contig9343:189..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-----PVDMSESPGLTIPKATPLKVLLSPRL 306
            RDP+ W+    F PERFL   G  A+VD+ G+    +PFG+GRR C GA+ A+  + + LA L++ F+   P +       VDMS+  G+T+ +    K+ L PR+
Sbjct:  426 RDPTCWDKAEEFFPERFLE-QGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQ--KLYLVPRI 528          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVDMSESPGLTIPKATPLKVLLSPR 303
            RDP+ W++P +F+PERF     A           +L+ FG GRR+CPG+  A +++ L L  L+  FE     +  VDM E  G T+PKA PLK +   R
Sbjct:  405 RDPNTWDDPDSFKPERFEKEEEAQ----------KLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAICKAR 494          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPL---DQPVDMSESPGLTIPKATPLKVLLSP 300
            RDP  W++  +F+PERF         +D  G  FE +PFG GRR CPG S  L  ++L LA+LL+ F+   P     + +D++ES G+T  +   L ++ +P
Sbjct:  401 RDPKYWDDAESFKPERF-----EQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLIATP 497          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P+ W++P  F+PERFL      + V+  G  F  IPFG GRRSCPG   AL +L +T+ R++ +FEL  P  Q  +D SE  G
Sbjct:  406 NPAHWKDPQVFRPERFLE---EESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGG 486          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRG-QQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFE-LATPLDQPVDMSESPGLTIPKATPLKVLLSPRL 306
            DP+VW +P  F P+RFL G     D D+ G ++ +++PFG GRR CPG   A   ++L LAR++  FE  A P +  VD SE    T+    PL+  +  R+
Sbjct:  401 DPNVWSDPEKFDPDRFLSGR---EDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPLRAKVKLRI 499          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.090e-12
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATP 219
            RDP +W NP  F P+RFL      + +D RG  FEL+PFGSGRR CPG +  + ++ L L  LL+ F+   P
Sbjct:  400 RDPKLWTNPDEFNPDRFLD-----SSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLP 466          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.424e-12
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P+ W+ P  F+PERFL      + V+  G  F  +PFG GRRSCPG   AL +L +TL RL+ +FEL  P  Q  +D +E  G
Sbjct:  405 NPAQWKKPEEFRPERFLE---EESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGG 485          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.424e-12
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQ-FELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVDMSESPGLTIPKATPLKVLLSPRL 306
            DP++W  P  F P+RF  G     D D+ G    ++IPFG GRR CPG + A   + L LARL+  FE A P +  VD +E    T+     L+  + PR+
Sbjct:  414 DPNLWSEPEKFDPDRFYLGK---EDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTRVDFTEKLEFTVVMKNTLRAKIKPRM 511          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.424e-12
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVDMSESPGLTIPKATPL 282
            RDP+ W  P  F P+RFL      + VD +G  FE +PFG GRR CPG + AL  + L LA+LL  F+  +  ++ ++M ES G+T+ +   L
Sbjct:  396 RDPNYWIEPEKFNPDRFL-----ESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQSNTEK-LNMKESRGVTVRREDDL 482          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.860e-12
Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P  W+ P  F+PERFL      A V+  G  F  +PFG GRRSCPG   AL +L +T+ RL+ +FEL  P  Q  +D  E  G
Sbjct:  406 NPDQWKKPEEFRPERFLE---EEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGG 486          
The following BLAST results are available for this feature:
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C71C1_MAIZE2.869e-1337.74Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C81D1_ARATH3.747e-1339.00Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71D7_SOLCH3.747e-1337.25Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
TCMO_RUTGR8.347e-1344.05Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C77A1_SOLME8.347e-1339.22Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
C71BS_ARATH1.090e-1245.83Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
TCMO_CICAR1.424e-1244.05Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C77A2_SOLME1.424e-1238.61Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C71DC_CATRO1.424e-1240.86Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
TCMO_HELTU1.860e-1244.05Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00479 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00479 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623388 ID=BQ623388; Name=BQ623388; organism=Citrus sinensis; type=EST; length=520bp
CAAAGGGATCCAAGTGTTTGGGAAAATCCATCGGCCTTCCAACCAGAGAG
ATTTCTCCCAGGCCATGGCGCCCATGCAGATGTTGATGTTAGGGGCCAAC
AATTTGAACTCATTCCTTTTGGCTCTGGCCGACGTTCTTGCCCAGGTGCA
TCATCTGCTCTCCAGGTCCTTCACCTCACGCTTGCTCGACTCCTTCATTC
ATTTGAACTAGCAACCCCATTGGATCAGCCTGTTGACATGTCAGAGTCTC
CTGGCTTAACCATACCGAAGGCCACCCCATTGAAGGTTCTCCTTTCTCCT
CGCCTCCTCCCTGCCAACCCCTATGGCTTTTGAGTTTGAGCAATTATTAA
ATCCAGCAAGCAAAGCTCGAAGTGCTTAATAATTATTAGCTTATTGTTTA
CTGAATAAAGCGAGCTGTAGTGTTGGTTAAATTACTTTCTTAATGTTATG
CACTTACTACAAATTACTGCTGCTGTTGTGGGCGATCTTTGCTTGCATGA
ATTAAGTTTTTTCTTTCAAA
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