BQ623388

Overview
NameBQ623388
Unique NameBQ623388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.860e-12
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATP---LDQPVDMSESPGLTIPKATPLKVL 291
            RDP  W  P  F PERF+        ++ +GQ FEL+PFG+GRR CPG ++ + ++ L L  LL+ F+ + P     + +DM E     I K   L+++
Sbjct:  399 RDPKNWTKPDEFIPERFVDN-----PIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELV 492          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.429e-12
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P  W+ P  F+PERFL      + V+  G  F  +PFG GRRSCPG   AL +L +T+ RL+ +FEL  P  Q  VD +E  G
Sbjct:  406 NPDQWKKPEEFRPERFLE---EESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGG 486          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.429e-12
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P+ W+ P  F+PERF       + V+  G  F  +PFG GRRSCPG   AL +L +TL RL+ +FEL  P  Q  +D SE  G
Sbjct:  406 NPAHWKKPEEFRPERFFE---EESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 486          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.429e-12
Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQ-FELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVDMSESPGLTIPKATPLKVLLSPR 303
            RDP  WE P AF+PERF+   G    VD+ G +  +++PFG+GRR CPG   A+  L   +A ++  F+        VD++E    T+    PLK L  PR
Sbjct:  406 RDPVEWEEPMAFKPERFM---GEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHEVDLTEKLEFTVVMKHPLKALAVPR 503          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.429e-12
Identity = 38/92 (41.30%), Postives = 50/92 (54.35%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-----PVDMSESPGLTI 264
            RDP+VWE P  F PERF+   G        GQ F  +PFGSGRR CPGA+  L  + + LA L++ F+   P ++      V M E  GL +
Sbjct:  431 RDPAVWEKPEEFMPERFMRD-GWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLML 521          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.172e-12
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P+ W+ P  F+PERFL      + V+  G  F  +PFG GRRSCPG   AL +L +TL RL+ +FEL  P  Q  +D +E  G
Sbjct:  406 NPANWKRPEEFRPERFLE---EESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGG 486          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.172e-12
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P+ W+ P  F+PERF       + V+  G  F  +PFG GRRSCPG   AL +L +T+ R++ +FEL  P  Q  VD SE  G
Sbjct:  406 NPNSWKKPEEFRPERFFE---EESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGG 486          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.172e-12
Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVD 237
            RDP +W NP  F P+RFL      + +D +G  FEL+PFGSGRR CPG +  + ++   L  LL+ F+   P  +  D
Sbjct:  400 RDPKLWTNPDEFNPDRFLD-----SSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLPEKEEAD 472          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.143e-12
Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQ-PVDMSESPG 255
            +P+ W+ P  F+PERF         V+  G  F  +PFG GRRSCPG   AL +L +TL RL+ +FEL  P  Q  +D SE  G
Sbjct:  407 NPAHWKKPEEFRPERFFEEESL---VEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 487          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.143e-12
Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVDMSESPGLTIPKATPLKVLLSPR 303
            RDP +W   + F+PERF          + +G+  +LI FG GRR+CPG   A++ + +TLA L+  F+        +D++E  G T+ K  PLK +   R
Sbjct:  401 RDPELWTEATTFKPERF----------EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGDKIDLAERDGFTLTKLVPLKAMCKSR 490          
The following BLAST results are available for this feature:
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C71B5_ARATH1.860e-1236.36Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_ZINEL2.429e-1244.05Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_PHAAU2.429e-1244.05Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C89A2_ARATH2.429e-1238.61Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE2.429e-1241.30Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
TCMO_GLYEC3.172e-1244.05Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_ARATH3.172e-1242.86Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C71BT_ARATH3.172e-1241.03Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN4.143e-1244.05Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C81E1_GLYEC4.143e-1235.00Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00479 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00479 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623388 ID=BQ623388; Name=BQ623388; organism=Citrus sinensis; type=EST; length=520bp
CAAAGGGATCCAAGTGTTTGGGAAAATCCATCGGCCTTCCAACCAGAGAG
ATTTCTCCCAGGCCATGGCGCCCATGCAGATGTTGATGTTAGGGGCCAAC
AATTTGAACTCATTCCTTTTGGCTCTGGCCGACGTTCTTGCCCAGGTGCA
TCATCTGCTCTCCAGGTCCTTCACCTCACGCTTGCTCGACTCCTTCATTC
ATTTGAACTAGCAACCCCATTGGATCAGCCTGTTGACATGTCAGAGTCTC
CTGGCTTAACCATACCGAAGGCCACCCCATTGAAGGTTCTCCTTTCTCCT
CGCCTCCTCCCTGCCAACCCCTATGGCTTTTGAGTTTGAGCAATTATTAA
ATCCAGCAAGCAAAGCTCGAAGTGCTTAATAATTATTAGCTTATTGTTTA
CTGAATAAAGCGAGCTGTAGTGTTGGTTAAATTACTTTCTTAATGTTATG
CACTTACTACAAATTACTGCTGCTGTTGTGGGCGATCTTTGCTTGCATGA
ATTAAGTTTTTTCTTTCAAA
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